ggKbase home page

PLM2_5_b1_sep16_scaffold_14298_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1917..4052)

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein B Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEW6_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 709.0
  • Bit_score: 1191
  • Evalue 0.0
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 709.0
  • Bit_score: 1191
  • Evalue 0.0
excinuclease ABC subunit B similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 709.0
  • Bit_score: 1191
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2136
ATGCGCGCCATCACCGACATCGTCCCGACCCAGGGCACCTTCAGGGTCGTCAGCGAGTTCGAGCCCTCGGGCGACCAGCCGGCGGCCATCGACTCGCTGGAGCAGCGGATCAAGTCCGGCGCGCGCGACTCCGTGCTGCTCGGCGCCACCGGCACCGGCAAGTCGGCGACGACGGCCTGGCTCATCGAGCGGCTGCAGCGCCCGACGCTGGTGATGGCGCCGAACAAGACGCTGGCCGCGCAGCTGGCCAACGAGTTCCGCGAGCTGCTGCCCAACAACGCGGTCGAATACTTCGTCTCCTACTACGACTACTACCAGCCCGAGGCGTACGTGCCGCAGACGGACACGTACATCGAGAAGGACTCCTCGATCAACGAGGAGGTCGAGCGGCTGCGCCACTCGGCGACGATGTCCCTGCTCACCCGGCGGGACGTGGTCGTCGTCGCCACCGTCTCCTGCATCTACGGCCTCGGCACCCCGCAGGAATACGTCGACCGCTGCGTCCGGCTGCAGATCGGCCAGGAGATCGAGCGCGACCTGATCCTGCGCAACCTGGTCACCGAGCAATACACCCGCAACGACCTGTCCTTCACCCGCGGCACGTTCCGGGTCCGCGGCGACACGATCGAGATCTTCCCGGTCTACGAGGAGCTCGCGGTCCGGGTCGAGATGTTCGGCGACGAGATCGAGCGGCTCTATTACCTGCACCCGCTGACCGGCGAGGTGATCCGGGAGGTCGACGAGGTCTTCGTGTTCCCGGCGTCGCACTACGTGGCCGGTCCGGAGCGGATGGAGCGGGCGATCGACCGGATCGAGAAGGAGCTGGTCGAGCGGCTGGCCGAGCTGGACAAGCAGGGCAAGCTCCTGGAGGCGCAGCGGCTGCGGATGCGCACGACGTACGACATCGAGATGATGCGCCAGGTCGGCTTCTGCTCCGGCATCGAAAACTACTCGCGCCACATCGACGGGCGCTCGGCCGGCGAGCCGTCGTTCACCCTGCTCGACTACTTCCCGGACGACTTCCTCATGGTCATCGACGAGTCGCACAACACGGTCCCGCAGATCGGCGGGATGTACGAGGGCGACATGTCCCGCAAGCGGATGCTCGTCGAGCACGGCTTCCGGCTGCCGTCCGCGATGGACAACCGGCCGCTGAAGTGGGAGGAGTTCGCCGAGCGGATCGGCCAGACCGTCTACCTCTCGGCCACCCCGGGGCCGTACGAGCTGGGTCGCACCGGCGGTGAGTTCGTCGAGCAGGTGATCCGGCCGACCGGCCTGGTCGACCCCGAGGTCGTGGTCAAGCCGACGAAGGGCCAGATCGACGACCTCGTGCACGAGATCCGTGCGCGGGCCGAGCGGGACGAGCGGGTCCTGGTCACGACGCTGACCAAGAAGATGGCCGAGGACCTCACCGACTACCTGCTCGAGCTCGGCGTCCGGGTGCGCTACCTGCACTCCGAGGTGGACACGCTGCGCCGGGTGGAGCTGCTGCGCGAGCTGCGGCAGGGCGAGTTCGACGTGCTGGTCGGCATCAACCTGCTGCGGGAGGGCCTCGACCTGCCCGAGGTCTCGCTGGTGTCGATCCTCGACGCCGACAAGGAGGGCTTCCTGCGCTCCGGGACCTCGCTGATCCAGACGATCGGCCGGGCCGCGCGCAACGTCTCCGGCCAGGTCCACATGTACGCGGACAAGATCACCCCGTCGATGGCCAAGGCGATCGACGAGACCAACCGGCGGCGGCAGAAGCAGATCGCCTACAACACCGAGCGCGGCGTCGACCCCCAGCCGCTGCGCAAGCGGATCGTCGACATCCTGGACGGGATCTACCGGGACGCCGAGGACACCGAGCACGAGCTGGTCGGCGGGTCCGGGCGACAGCAGTCCAGGGGCAAGGCGCCGGTGCCGGGGCTCTCGTCCCGACCGGGCCGGGGCGGTCGGACCAGCGGCGCCGGGGCGCACGCCAAGGACCTGGCCGGGATGCCGCGGGCCGAGCTGGCCGACCTCATCCAGCAGCTCAACGAGCAGATGCTGGCCGCGGCCCGGGAGCTGCAGTTCGAGCTGGCCGCGCGGCTGCGCGACGAGGTCGGCGAGCTGAAGAAGGAGCTGCGCGGCATGGACGCGGCCGGCGTCAAGTAG
PROTEIN sequence
Length: 712
MRAITDIVPTQGTFRVVSEFEPSGDQPAAIDSLEQRIKSGARDSVLLGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINEEVERLRHSATMSLLTRRDVVVVATVSCIYGLGTPQEYVDRCVRLQIGQEIERDLILRNLVTEQYTRNDLSFTRGTFRVRGDTIEIFPVYEELAVRVEMFGDEIERLYYLHPLTGEVIREVDEVFVFPASHYVAGPERMERAIDRIEKELVERLAELDKQGKLLEAQRLRMRTTYDIEMMRQVGFCSGIENYSRHIDGRSAGEPSFTLLDYFPDDFLMVIDESHNTVPQIGGMYEGDMSRKRMLVEHGFRLPSAMDNRPLKWEEFAERIGQTVYLSATPGPYELGRTGGEFVEQVIRPTGLVDPEVVVKPTKGQIDDLVHEIRARAERDERVLVTTLTKKMAEDLTDYLLELGVRVRYLHSEVDTLRRVELLRELRQGEFDVLVGINLLREGLDLPEVSLVSILDADKEGFLRSGTSLIQTIGRAARNVSGQVHMYADKITPSMAKAIDETNRRRQKQIAYNTERGVDPQPLRKRIVDILDGIYRDAEDTEHELVGGSGRQQSRGKAPVPGLSSRPGRGGRTSGAGAHAKDLAGMPRAELADLIQQLNEQMLAAARELQFELAARLRDEVGELKKELRGMDAAGVK*