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PLM2_5_b1_sep16_scaffold_12359_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1427..2641)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Amycolatopsis methanolica RepID=UPI00036781D8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 395.0
  • Bit_score: 565
  • Evalue 2.30e-158
rpoE; RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 395.0
  • Bit_score: 565
  • Evalue 6.60e-159
RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AIJ23647.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 395.0
  • Bit_score: 565
  • Evalue 3.30e-158

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGACAGTCCCACCCGGGGTCGAGCAGCTGCTGCGCGAGCTGGCGCCGCGGGTGCTCGGGGTGCTGGTCCGGCGTACCGGCGACTTCGAGACCTGCGAGGACGCGGTGCAGGAGGCGCTGCTGGCGGCGGCGACCCAGTGGCCGGCCGAGGGCGTGCCGGCGAACCCGACGGGTTGGCTGGTCACCGTCGCGTCCCGGCGGCGGACCGAGCTCTGGCGGAACGAGACCGCCCGCCGGCGCCGGGAGGTGGCCGTGTTCGAGGCGGCGGTCGAGCCGGAGCCGGTGACCGGGGTGGACGACACGCTCACCCTGCTGACCCTGTGCTGCCACCCGGCGCTGACGCCGGTGTCGCAGGTCGCGCTGACCCTGCGCGCGGTCGGCGGGCTCACCACGGCCGAGATCGCCCGGGCCCTGCTGGTGCCGGAGCCGACCGTCGCGCAGCGGATCAGCCGGGCCAAGCAGCGGATCAAGGCCGCGGGCGCGACGTTCGCACCGCCGGTGGCCGAGGAGCGGGCGGACCGGCTCGCGGCCGTGCTGCACGTGCTCTACCTGATCTTCACCGAGGGGCACACGGCCAGCTCGGGCAGCTCGCTGCAGCGGGTGGAGCTGAGCGCGGAGGCGCTGCGGCTGGCCCGGCAGCTGCACGCCGCGGCGCCGGACGACGGCGAGGTCGCCGGGCTGCTGGCGCTGATGCTGCTCACCGACGCCCGCCGGCCGGCCCGGACGACGCCGGACGGCAACCTCGTGCCGCTGGCGTCGCAGGACCGGTCCCGGTGGGACGCGGCGATGATCGCCGAGGGCACCGCGCTGCTGGAGGCGACGCTGCCGGTCGCGCCGCTCGGCCCGTACCAGCTGCAGGCGGCGATCGCGGCCGTGCACGACACCGCGCCGACCGCGGCGGACACCGACTGGGCGCAGATCCTCGGGCTGTACGAGCTGCTCACCGTCGTCGCGCCCGGCCCGATGGTCGAGCTGAACCGGCTGGTCGCGGTGGCGATGGTGCACGGGCCGGAGGCGGGGCTGGCGGCGCTGGGCGCCGCGGCCGAGGACCCCGCGCTGGCGGGGCACCACCGGCTCGCCGCGGTGCGCGCCCACCTGCTGGAGCTGGCCGGGGACGCGCCGGCGGCTCGCGCCGCCTACCTGGAGGCGGCCCGGCTCACGCTGTCGGCGCCCGAGCGCCGCTATCTGGAGTCGCGCGCCGCCGGCACCGGCTGA
PROTEIN sequence
Length: 405
VTVPPGVEQLLRELAPRVLGVLVRRTGDFETCEDAVQEALLAAATQWPAEGVPANPTGWLVTVASRRRTELWRNETARRRREVAVFEAAVEPEPVTGVDDTLTLLTLCCHPALTPVSQVALTLRAVGGLTTAEIARALLVPEPTVAQRISRAKQRIKAAGATFAPPVAEERADRLAAVLHVLYLIFTEGHTASSGSSLQRVELSAEALRLARQLHAAAPDDGEVAGLLALMLLTDARRPARTTPDGNLVPLASQDRSRWDAAMIAEGTALLEATLPVAPLGPYQLQAAIAAVHDTAPTAADTDWAQILGLYELLTVVAPGPMVELNRLVAVAMVHGPEAGLAALGAAAEDPALAGHHRLAAVRAHLLELAGDAPAARAAYLEAARLTLSAPERRYLESRAAGTG*