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PLM2_5_b1_sep16_scaffold_43487_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1080..1592

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit Tax=Actinoplanes sp. N902-109 RepID=R4LNI3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 156.0
  • Bit_score: 166
  • Evalue 1.70e-38
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 156.0
  • Bit_score: 166
  • Evalue 4.90e-39
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AGL20013.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 156.0
  • Bit_score: 166
  • Evalue 2.40e-38

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Taxonomy

Actinoplanes sp. N902-109 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGGATCCGAGTACGGACGACGACTTCCGCGACTTCGTGCGCGCCCGCTCGCCGGCGCTGCTCGGCACCGCGTACGCGCTGACCGGCGACCGCGGCCTGGCCGAGGACCTGCTCCAGACCGCCCTGCTGAAGACCTACCGGCACTGGCGAGAGGTGCGGCGGTCGGACCGGCCGGAGGCGTACGTCCGGCGGGTGATGACGAACCAGCGCATCTCCTGGTGGCGTCGCCGCCGGGTCGCCGAGCACGGCGGGACGGTTCCGGACCGGGCCGGCCCTTCGCCGTACCCGGTGGAGGACCGGGACGAGCTCTGGCGCGCGCTGCAGCAGCTGCCGCCCCGGACCCGGGCCGTGCTCGTGCTGCGCTACTGGGAGGACCTGGCCGAGGCCGACGTCGCCCGGATCCTGGGCTGCTCGGTCGGCAGCGTGAAGAGCCAGGCGTCCCGGGGCCTGCACCGGCTGCGCGCCGTCCTCGCACCCGATGAGGCCACCGAGCAGGAGGGAACGCGGTCGTGA
PROTEIN sequence
Length: 171
VDPSTDDDFRDFVRARSPALLGTAYALTGDRGLAEDLLQTALLKTYRHWREVRRSDRPEAYVRRVMTNQRISWWRRRRVAEHGGTVPDRAGPSPYPVEDRDELWRALQQLPPRTRAVLVLRYWEDLAEADVARILGCSVGSVKSQASRGLHRLRAVLAPDEATEQEGTRS*