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PLM2_5_b1_sep16_scaffold_77688_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1692..2216)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037074BB similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 158.0
  • Bit_score: 167
  • Evalue 1.00e-38
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EWM17353.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 158.0
  • Bit_score: 171
  • Evalue 1.00e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 169.0
  • Bit_score: 166
  • Evalue 5.00e-39

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Taxonomy

Kutzneria sp. 744 → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTGGAGGACTGGGAGCGGGACTTCGCCGGCTACGTCGAGGGACGCAGGGCGGCGCTGCGGGCCACCGCATACCTGCTCTGCGGCGACTGGCACGCCGCCGACGACCTCACCCAGACCGCGCTGACCAGGCTCTACCTCGCCTGGCGGCGGATCGACCGGATCCGCAGCATCGACGCGTACGCCCGGCAGGTGCTGGTGCGCGCTTTCCTGGACGAGCGGCGCCGGCCCTGGCGGCGGGAGCGGTCCTCGGCCGACCCGCCCGACGCGCCGGCGATCCACGACCTGCCGGCGGCGGTGGACGAGCGGCTCTCGCTGGAGGCGACGTTGCGCCGGCTGCCCGCCCGGCAGCGGGCCGTGCTGGTCCTGCGCTACTGGTGCGACCTCGACATCCGCGCCACGGCCGAGGTCCTCGGCATCAGCGAGGGCACGGTGAAGAGCGCTTCCGCCCGCGGGCTGGCCACCGTGCGGGAAGCCCTGCAGCCGCCGCAACCGCAGACCCACCAGATCGGGGGCGAGCAGCCATGA
PROTEIN sequence
Length: 175
VEDWERDFAGYVEGRRAALRATAYLLCGDWHAADDLTQTALTRLYLAWRRIDRIRSIDAYARQVLVRAFLDERRRPWRRERSSADPPDAPAIHDLPAAVDERLSLEATLRRLPARQRAVLVLRYWCDLDIRATAEVLGISEGTVKSASARGLATVREALQPPQPQTHQIGGEQP*