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PLM2_5_b1_sep16_scaffold_79639_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1..543)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 184.0
  • Bit_score: 241
  • Evalue 6.40e-61
Transcription-repair coupling factor Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K370_STRRC similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 184.0
  • Bit_score: 237
  • Evalue 8.50e-60
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 184.0
  • Bit_score: 235
  • Evalue 7.00e-60

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Taxonomy

Streptomyces sp. NRRL B-1568 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGCTGTCCGGACTGCTTGACGCCGTCCTCCCCGATCCCGCTCTGTCGCGCGCCGTGTCCTCGGCCGGCGTGGACTCGCTGGAGCTGACCGCTCCGGCCGCGCTGCGCCCGTTCGTCGTCTCGGCGCTGGCCGCCGATCCCTCGCACGGCGGCGCCGGCCGACCGGTGCTCGCCGTCACCGCCACCGGCCGCGATGCCGAGGACCTGGTCGACGCGCTGCGCTGCGTGCTGCCGGCCGACGAGGTCGTCGGCTATCCGTCCTGGGAGACCCTTCCGCACGAGCGGCTCTCGCCGCGCGCGGACACGGTCGGCCGCCGGCTGGCGGTGCTGCGCCGGCTCGCCCACCCGAGCGCCGACGACCCGGCGACCGGGCCGGTGCGGGTGGTGGTCGCGTCGATCCGGGCCGTGCTCCAGCCGCAGGTGCCGGGTCTCGGCGACCTCGAGCCGGTCGCGGCCAGGGTCGGCGACGTTGTCGACCTCGAGGACCTGGTCGAGCGACTGGTCGCGGTCGGCTACGCGCGGGTGGAACTGGTCGAGAAG
PROTEIN sequence
Length: 181
MSLSGLLDAVLPDPALSRAVSSAGVDSLELTAPAALRPFVVSALAADPSHGGAGRPVLAVTATGRDAEDLVDALRCVLPADEVVGYPSWETLPHERLSPRADTVGRRLAVLRRLAHPSADDPATGPVRVVVASIRAVLQPQVPGLGDLEPVAARVGDVVDLEDLVERLVAVGYARVELVEK