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PLM2_5_b1_sep16_scaffold_77247_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(951..1481)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Frankia sp. CN3 RepID=G6HH15_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 177.0
  • Bit_score: 174
  • Evalue 6.60e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 159.0
  • Bit_score: 165
  • Evalue 8.70e-39
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABW15150.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 159.0
  • Bit_score: 165
  • Evalue 4.30e-38

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGGACGACAGCAGCGAGCGGGCGTTCGAGCGGTTCGTCGCCGCCGAGGGCACCTCCCTGCTCCGGTTCGCCTACCTGCTGACCGGCGGCCGGGAAGCGGCCGAGGACCTGCTGCAGTCCTCGCTGGAGCGGTGCTACCGGCACTGGCGGCGGGTGGAGCGCACCGACCGGCCGGAGCGGTACGTCCGGCGGATGCTCGCCAATGCGGCCACAGACCGGTGGCGGGGACTCCGCCGGCGCCCGGAGCTGCCGCTGGCGGCGGCGGCCGAGCCCGTGGCGGCGGACGCGACCGAGGCCCTGCTGATCCGCGACGAGCTGTTCCGGGCACTGCGCGCCCTGTCCGCGCGGCAGCGGGTCGTCGTCGTGCTCCGGTACGTCGAGGACCTGTCCGAGCGGGACACCGCCGCGCTGCTGGACTGCTCGGTCGGGTCGGTCAAGGCGCACGCCAGCCGCGGGCTGGCCCGGATGCGCGCCGAGCTGGCCGAGTCCGGCGCCAGCCTACCCGCCGCGGGAGGACGCGATGACCACTGA
PROTEIN sequence
Length: 177
VDDSSERAFERFVAAEGTSLLRFAYLLTGGREAAEDLLQSSLERCYRHWRRVERTDRPERYVRRMLANAATDRWRGLRRRPELPLAAAAEPVAADATEALLIRDELFRALRALSARQRVVVVLRYVEDLSERDTAALLDCSVGSVKAHASRGLARMRAELAESGASLPAAGGRDDH*