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PLM2_5_b1_sep16_scaffold_94948_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(440..1414)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKC7_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 337.0
  • Bit_score: 283
  • Evalue 1.90e-73
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:CEL22120.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 261.0
  • Bit_score: 284
  • Evalue 1.50e-73
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 337.0
  • Bit_score: 283
  • Evalue 5.30e-74

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 975
GTGTCGGTCCGGAACGCTCTGGCCGCAGATCACCACCGCGACGCCGACGCAAACCGTCCCGGCGACGCCGAGTTGATCTCCGCGGTGCGGGCCGGGTCCGTCGACGCGTACGCGGCGCTCTACCGCCGGCACCTGGCGTCCGCCCGGGCGCTGGCCCGGCAGCTGACCGGCTGCCCGGCGGAAGCGGACGACCTGGTCGCCGAGGCGTTCACCAGGCTGTTCACCACCCTGCGCCGCGGTGGTGGGCCGGACGCGGCGTTCCGGGCGTACCTGCTGACCGCGCTGCGCCATATCCGCTACGACCGGACCCGTCAGGACCACAGAGTGGAACTGTCCGGCGATATGACCCGGTACGACGCGGGGGTGCCGTGGCAGGACAGGGCCGTCGAGGAGCTCGAGTCGAGGCTGGCCAGCCGCGCCTTCACCCGGCTGCCCGAGCGCTGGCAGATCGTGCTGTGGCGAACCGAGGTCGAGCAGCAGAGCCCGGCCGAGGTGGCGCCGCTGCTCGGCCTCACCCCGAACGGCCTGTCCGCGCTGGCCTACCGGGCCCGGGAGGGGCTGCGGCAGGCGTACCTGCAGGAGCACGTCACGAGCGTCGATGCCAGCGCGTATGCCAGCGCGGATGCCAACGCGGATGCCAGGGTGCTCGACCCGCACTGCGGGCCGCACCGGCACGGCGCCACGCTCGACCAACTCGGCGCCTGGGCCCGGGGCGGGCTGTCCCCCCGGCGACAGGCCCGGATGGATGCCCACCTGGCGACCTGCCTGGACTGCCGGGTGCTTGCGGCGGAGTTGGCCGACGTCAGCGGCGGGCTGTGCCGCGAACCGCCCCCCGCACCGCAGGCACTGGCCAGGACCGACGCCGGCAATCGGCGTAGCCCACCCAACGGAGGTCCACAGTGGACAAGGGTGCCGACGGCCGAATCGGACGATCCACTCCCCCGACGACTCCCTGGTCGCGGGGCCGGCGCCTAG
PROTEIN sequence
Length: 325
VSVRNALAADHHRDADANRPGDAELISAVRAGSVDAYAALYRRHLASARALARQLTGCPAEADDLVAEAFTRLFTTLRRGGGPDAAFRAYLLTALRHIRYDRTRQDHRVELSGDMTRYDAGVPWQDRAVEELESRLASRAFTRLPERWQIVLWRTEVEQQSPAEVAPLLGLTPNGLSALAYRAREGLRQAYLQEHVTSVDASAYASADANADARVLDPHCGPHRHGATLDQLGAWARGGLSPRRQARMDAHLATCLDCRVLAAELADVSGGLCREPPPAPQALARTDAGNRRSPPNGGPQWTRVPTAESDDPLPRRLPGRGAGA*