ggKbase home page

PLM2_5_b1_sep16_scaffold_2062_11

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 11682..13469

Top 3 Functional Annotations

Value Algorithm Source
Squalene cyclase Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218A7_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 583.0
  • Bit_score: 990
  • Evalue 4.30e-286
Squalene--hopene cyclase {ECO:0000313|EMBL:KJC49507.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 581.0
  • Bit_score: 991
  • Evalue 2.70e-286
squalene cyclase similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 583.0
  • Bit_score: 990
  • Evalue 1.20e-286

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
ATGCATTCCGTCAGCAAGTTAACGGGAATTGAGAACGAAGCCTCCCTGGAGGCGAGCATCGCGTCAGCGACGAGCGCGTTGCTCGAATACCGGCGGCCGGATGGACACTGGGTGTTCGAACTGGAAGCCGATTCCACCATCCCGGCCGAATATGTGTTGCTTCGCCACTACTTGGGCGAGGCAGTTGACGCGCCGCTGCAGACCAAGATCGCCAATTACCTGCGCCGGGTTCAGGGCGCCCATGGCGGCTGGCCACTGGTGCACGACGGCGATTTCGACATGAGCGCCAGCGTCAAGGCGTATTTCGCGCTGAAGATGATCGGCGATTCGGCGGATGCGCCGCATATGGCGCGGGCGCGCGAGGCGATCCGGTCGCGCGGCGGCGCCATCCACAGCAACGTCTTTACCCGGTTCATGCTAGCGATGTTCGGGGTACTGACATGGCGGAGCGTGCCGGTGCTGCCGGTCGAGATCATGCTGCTGCCGTTGTGGTCGCCGTTTCATCTCAACAAGATTTCGTACTGGGCGCGGACCACGATCGTGCCGCTGATGGTCCTGTCGGCGCTGAAACCCCGTGCGAAAAATGTCGGCGGCATCGGCATCGACGAGTTGTTCCTGCAGGAGCCGCATTCGATCGGCATGACGGCCAAGGCGCCGCATCAGAGCTGGGGCTGGTTTCTGCTATTCCGCGGACTGGACAGCGTGTTGCGGGTGATCGAGCCCCTGTTTCCTAAGAAGCTGCGTGCCCGCGCGATCGATAGCGCGATCGCCTTCATCGAAGAGCGGCTGAACGGCGAAGACGGGTTGGGCGCGATCTATCCGCCGATGGCCAACGCCGTGATGATGTATGAGGTGCTCGGCAAGCCTGCCGATTATCCGCCGCGCGCCGTCACACGAAGGGGCCTCGACAGGCTTCTGGTGATCGGCGAGCACGAAGCCTATTGCCAGCCCTGCATGTCGCCGGTGTGGGACACGACGCTGGCCTGCCATGCCTTGATCGAGGCAGGTGGCGAGCAGGCGTTACCTGCAGCCAGGCAGGGCCTGGACTGGCTGCTGCCGAAACAGGTGCTGGATATCAAAGGCGACTGGGCCGTGAAGCGGCCGGAGGTTCGCCCCGGCGGTTGGGCTTTTCAGTACAATAATGCCTATTACCCTGACCTCGACGACACCGCCGTGGTGGTGATGGCGATGGATCGCACCCGGCGCGCCGGCCAAAGCCAGGAATACGATGTTGCGATCGCCCGCGGCCGCGAATGGATCGAGGGCATGCAGAGCCGCGATGGCGGCTGGGCCGCCTTCGACGTCAACAATCTCGAATATTACCTCAACAACATTCCGTTCTCCGATCACGGTGCGATGCTCGACCCGCCGACCGAAGACGTCACCGCCCGCTGCTGCTCGATGCTGGCTCAACTCGGTGCGACCGCCCAAAACAGCGAGGCGCTTGCGGCCGGGGTCGCATATCTGCGCCGGACCCAGCTTGCGGAGGGGTCGTGGTACGGCCGCTGGGGGCTGAACTACATCTACGGCACCTGGTCGGTGCTGTGCGCGCTCAACGCCGCGGGGGTGGACCCACAGGACCCCGCGGTCCGCAAGGCGGTCAACTGGCTGCTGTCGATCCAGAACGCCGACGGCGGCTGGGGCGAGGATGCCACCAGTTACCGGCTCGACTACAAGGGATTTGAGGGGGCTCCGACCACCGCATCGCAAACGGCATGGGCCTTGCTTGGCCTGATGGCGGCGGGCGAGGGTGGGCATCCGGCGGTTGTACGGGGCGTGGAGTACCTA
PROTEIN sequence
Length: 596
MHSVSKLTGIENEASLEASIASATSALLEYRRPDGHWVFELEADSTIPAEYVLLRHYLGEAVDAPLQTKIANYLRRVQGAHGGWPLVHDGDFDMSASVKAYFALKMIGDSADAPHMARAREAIRSRGGAIHSNVFTRFMLAMFGVLTWRSVPVLPVEIMLLPLWSPFHLNKISYWARTTIVPLMVLSALKPRAKNVGGIGIDELFLQEPHSIGMTAKAPHQSWGWFLLFRGLDSVLRVIEPLFPKKLRARAIDSAIAFIEERLNGEDGLGAIYPPMANAVMMYEVLGKPADYPPRAVTRRGLDRLLVIGEHEAYCQPCMSPVWDTTLACHALIEAGGEQALPAARQGLDWLLPKQVLDIKGDWAVKRPEVRPGGWAFQYNNAYYPDLDDTAVVVMAMDRTRRAGQSQEYDVAIARGREWIEGMQSRDGGWAAFDVNNLEYYLNNIPFSDHGAMLDPPTEDVTARCCSMLAQLGATAQNSEALAAGVAYLRRTQLAEGSWYGRWGLNYIYGTWSVLCALNAAGVDPQDPAVRKAVNWLLSIQNADGGWGEDATSYRLDYKGFEGAPTTASQTAWALLGLMAAGEGGHPAVVRGVEYL