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PLM2_5_b1_sep16_scaffold_15218_9

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 6978..7565

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 196.0
  • Bit_score: 338
  • Evalue 4.10e-90
diaminopimelate decarboxylase Tax=Bradyrhizobium japonicum RepID=UPI00035EC1BC similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 196.0
  • Bit_score: 339
  • Evalue 2.30e-90
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 196.0
  • Bit_score: 338
  • Evalue 1.10e-90

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAACCATTTCGACTATCGCAGCGGCGTACTTCACGCCGAGGCGGTCAATCTTTCTGAGCTGGCGGATGCGGTCGGCACGCCGTTCTATTGCTATTCGACCGCGACCCTGGAGCGCCACTACCGGGTGTTCAGCGAGGCCTTCGCCGACGAGAAGGCATTGGTGTGTTACGCCATGAAGGCCAACTCCAATCAATCGGTGCTGCGCACGCTGGCAAAGCTCGGCGCCGGAGCGGATGTGGTTTCGGGGGGCGAGCTGAAGCGCGCGCTGGCGGCCGGCATTCCGCCCGGCAAGATTTTGTTTTCAGGGATCGGCAAGGCCGAAGCCGAACTGCGCGCGGCGCTGCTTTCGGACATTCTCTGCATCAACGTCGAATCCGAGCCGGAGCTCGAACTGCTCTCGCGGTTGGCCGGCGAAACCGGCCGAATCGCAAGGATCTCGGTCCGGGTCAATCCCGACGTCGATTCCGGTTCCCACGCCAAAATCTCGACCGGCAAGTCCGAGAACAAGTTCGGCGTGCCGCTGGACCGCGCCCGCGCGGTCTACGCCCGCGCCGCGAAGCTGCCGGGGATCGAGGTCACCGGCGTC
PROTEIN sequence
Length: 196
MNHFDYRSGVLHAEAVNLSELADAVGTPFYCYSTATLERHYRVFSEAFADEKALVCYAMKANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPPGKILFSGIGKAEAELRAALLSDILCINVESEPELELLSRLAGETGRIARISVRVNPDVDSGSHAKISTGKSENKFGVPLDRARAVYARAAKLPGIEVTGV