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PLM2_5_b1_sep16_scaffold_12784_7

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(5089..6237)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 382.0
  • Bit_score: 714
  • Evalue 7.10e-203
Ribonuclease D Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215P9_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 382.0
  • Bit_score: 714
  • Evalue 5.00e-203
ribonuclease D similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 382.0
  • Bit_score: 714
  • Evalue 1.40e-203

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGATCTGATTACCACCACCTCGGAACTCGCCGCGGTTTGCGCCCGGCTCGCGAAACACCCGGTCATCACCGTCGATACCGAATTCCTGCGGGAGACGACCTATTATCCGCTGCTTTGCGTCGTGCAGATGGCGAGCGCGGAGGAAGCGGTCGTGGTCGACACGCTGGCCCCTGGCATCGACCTCAAGCCGTTCTTCGAGCTGATGGCTGATGAAAAGGTGCTCAAGGTTTTCCACGCCGCCCGTCAGGATATCGAAATCGTCTGGCATCAGACCGGCATCGTTCCGCACCCGATCTTCGACACTCAGGTCGCGGCCATGGTGCTCGGCTATGGCGATTCCATCGCCTACGACCAGCTGGTCGAGCGCATCGCCGGCCACCGGCCCGACAAGACCCACCGTTTCACCGACTGGTCGCGACGGCCGCTGACCGAAGAGCAGATCCACTACGCCGTGTCCGACGTCACCCATCTGCGCGATGTATTCACCGCGCTGGATGCCGATCTGAAGAAGCGCGGCCGCAGCGACTGGGTGAGCGAGGAAATGGAAGTTCTGACCTCGCCAAAGACCTACGATTTTCACCCCGAACGCGCATGGGAGCGGCTGAAGACGAGGGTTCGCAAGCCAAAGGAGCTTGCGGTGCTGATGGAAGTCGCGGCATGGCGCGAACAGGAGGCGCAAAGCCGCGACGTTCCGCGCAGTCGCGTCCTGAAGGACGATGCGGTCGGCGATATCGCCACCCATGCGCCGACCAGCCTCGAACGGCTGGCAAGTCTGCGCTCGCTGCCAAAGGGTTTTGACCGATCAAAATGGGGCGCCGATATCGTCGCCGCCGTGCAACGCGGCATCGCGCGCGATCCCGCGACACTGCCTAAAATCGAAAAGCCGCGCGGCAACTCAAACGGCGCTGCGATCGTCGAGCTGCTGAAAGTTCTGCTGCGGATGACATCGGAGCGTCACGCCGTCGCCAGCAAGGTGATCGCAACCGTCGACGACCTGGAACAGATCGCCGCTGACGACAATGCCGACGTCGGCGCGCTGCACGGCTGGCGCCGCGAGCTGTTCGGCGAAGCGGCCCTGTCGCTGAAACAGGGACGGCTGGCACTGGCGATCGAAAAAGGCCGCGTGATCAGGGTCGACCGAAGCTAG
PROTEIN sequence
Length: 383
MDLITTTSELAAVCARLAKHPVITVDTEFLRETTYYPLLCVVQMASAEEAVVVDTLAPGIDLKPFFELMADEKVLKVFHAARQDIEIVWHQTGIVPHPIFDTQVAAMVLGYGDSIAYDQLVERIAGHRPDKTHRFTDWSRRPLTEEQIHYAVSDVTHLRDVFTALDADLKKRGRSDWVSEEMEVLTSPKTYDFHPERAWERLKTRVRKPKELAVLMEVAAWREQEAQSRDVPRSRVLKDDAVGDIATHAPTSLERLASLRSLPKGFDRSKWGADIVAAVQRGIARDPATLPKIEKPRGNSNGAAIVELLKVLLRMTSERHAVASKVIATVDDLEQIAADDNADVGALHGWRRELFGEAALSLKQGRLALAIEKGRVIRVDRS*