ggKbase home page

PLM2_5_b1_sep16_scaffold_65394_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 1293..2894

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136I4_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 533.0
  • Bit_score: 916
  • Evalue 9.30e-264
secD; preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 533.0
  • Bit_score: 916
  • Evalue 2.60e-264
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 533.0
  • Bit_score: 916
  • Evalue 1.30e-263

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGTTGTATTTCACGCGGTGGAAGGCGCTGGCGATCATCCTGACCGCGCTGGCGGTGTGCCTTTGCGCCGTTCCGAACTTCTTCCCGGAAGCGACGGTGAAAACCTGGCCGCAATGGGCGCAGCGTCATCTGGTGCTCGGCCTCGATCTGCAGGGCGGCTCGCACCTTCTGCTCGAGGTCGATGCCAACGCGGTCAGGAAGGACAAGCTCGACCAGGTGCGTGACGACGTTCGCCGCGTCCTGCGCGAAAACAAGATCGTCTATACCGGTCTTGCACCTCGCGCAGACAGCGTCGAAGTGCGCATCACCAAGGATACCGACCTGCCAACCGCGCTGAGCAAGCTGCGCGAGTTGTCGCAACCGCTCGGCGGTCTGCTCGGCACCAGCGGCCAGCGCAGCCTCGAAGTCAGCGACGCCGGCGGCGGGCTGATCCGGCTCACCGTGCCGCCCGCGGCGATCACCGACCGCATCAGGCAGGCCGTCGAACAGTCGATCCAGATTGTCGAACGTCGTGTCAATGAACTCGGCACGGTCGAACCGCTTATTCAAAGACAGGGCAATGATCGTATTCTGGTGCAGGTGCCGGGACTGGGCGATCCATCGCGCCTGATCAAAATTCTCGGCCAGACCGCCAAGATGGATTTCCGGATGGTCGATTCCACCGTTTCGCCGGATCAGGCGGTCGCCGGACGTGTGCCGCCGGATTCGGAAGTCCTGCCAAGCGCCGAGGGATCCAGGCAACCCTATGTCATCAAGAAGCAGGTGCTGGTCTCCGGCGGCGACCTGACCGACGCACAGCCCGGTTTCGACCAACGCTCGGGCGAGCCGATCGTGAGCTTCCGTTTCAACACTTCCGGCTCCCGCAAATTCGCACAAGCCACGTTGGAAAATGTCGGGCAACCCTTCGCCATCGTGCTCGACAACAAGGTCATCTCGGCACCCGTGATCCGTGAACCGATCACCGGCGGCTCCGGCCAGATTTCCGGCAGCTTCACGGTGCAGGCGGCCAACGATCTCGCGATCCTTCTGCGTGCCGGCGCGCTGCCGGCGCCGTTGACGGTCATTGAACAGCGAACCGTTGGACCGGGGCTCGGCCAGGACTCGATCCAGAAGGGTGAACTCGCCGCCTATGTCGGCTCGATCCTGGTGATCGTATTCATGTTGCTGACCTATCGGTTGTTCGGCGTGTTTGCCAACATCGCGGTCGCCATCAACGTCGCGATGATTTTCGGCGTGCTGTCGCTATTGAATGCGACGCTGACGCTGCCCGGCATCGCCGGCATCGTGCTCACGGTCGGCATCGCCGTCGACTCCAACGTGCTGATCTATGAACGTATCCGCGAGGAACTGCGTGGCGGCCGCAACGCGATTTCCGCGATCGACGCCGGTTTCAAACGGGCGCTGTCGACGATTCTCGATTCCAACATCACCACCTTCATCGCCGCCGCGGTGCTGTTCTATATCGGCACCGGGCCGGTGCGCGGCTTCGCCGTAACGCTCGGCATCGGCATCATCACCACGGTTTTCACCGCGTTTACGCTCACCCGCCTGATCGTCGCGGGCTGGGTGAGGTGGAAGCGGCCGCAAAGCGTGCCGATCTAG
PROTEIN sequence
Length: 534
MLYFTRWKALAIILTALAVCLCAVPNFFPEATVKTWPQWAQRHLVLGLDLQGGSHLLLEVDANAVRKDKLDQVRDDVRRVLRENKIVYTGLAPRADSVEVRITKDTDLPTALSKLRELSQPLGGLLGTSGQRSLEVSDAGGGLIRLTVPPAAITDRIRQAVEQSIQIVERRVNELGTVEPLIQRQGNDRILVQVPGLGDPSRLIKILGQTAKMDFRMVDSTVSPDQAVAGRVPPDSEVLPSAEGSRQPYVIKKQVLVSGGDLTDAQPGFDQRSGEPIVSFRFNTSGSRKFAQATLENVGQPFAIVLDNKVISAPVIREPITGGSGQISGSFTVQAANDLAILLRAGALPAPLTVIEQRTVGPGLGQDSIQKGELAAYVGSILVIVFMLLTYRLFGVFANIAVAINVAMIFGVLSLLNATLTLPGIAGIVLTVGIAVDSNVLIYERIREELRGGRNAISAIDAGFKRALSTILDSNITTFIAAAVLFYIGTGPVRGFAVTLGIGIITTVFTAFTLTRLIVAGWVRWKRPQSVPI*