ggKbase home page

PLM2_30_b1_sep16_scaffold_11863_1

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_13

partial RP 38 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 1..402

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 133.0
  • Bit_score: 159
  • Evalue 2.30e-36
Ribosomal protein S12 methylthiotransferase RimO Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 133.0
  • Bit_score: 159
  • Evalue 1.70e-36
30S ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 133.0
  • Bit_score: 148
  • Evalue 1.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 402
TTGCGCACGACTTTCATTGTTGGATTTCCTGGGGAAACCGAAGGGGAATTCGAAACGCTGCTCAATTTCATTCGGAAGACTCGATTTGAACGTCTCGGAATCTTCAAATATTCGCAGGAGCAGGGTTCGCGCGCAGCGAAATTGCCGAACCAAATCCCCCTGAAGGTCAAAAATGCGCGCTACCGGGTGGCGATGTCGATACAGCAACAGATCGCGTATGAGATTGCCTGCGAAAAAGTTGGAAGCGAACTCAAATTACTGGTCGATCAGCCGCATATCGCCCGGAGCGAAGGCGATGCCCCGGATGTCGATGCGCGCGTTGTCTTGTCCAGAGCGGCGTCCGTCGGTCAATTCGTTTGGCGCAGGATCGCTGGAAGCCGCGGATACGACCTTCTGGCCTAG
PROTEIN sequence
Length: 134
LRTTFIVGFPGETEGEFETLLNFIRKTRFERLGIFKYSQEQGSRAAKLPNQIPLKVKNARYRVAMSIQQQIAYEIACEKVGSELKLLVDQPHIARSEGDAPDVDARVVLSRAASVGQFVWRRIAGSRGYDLLA*