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PLM2_30_b1_sep16_scaffold_43898_4

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_13

partial RP 38 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(2258..4000)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 592.0
  • Bit_score: 679
  • Evalue 2.20e-192
DNA topoisomerase III (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 576.0
  • Bit_score: 661
  • Evalue 1.30e-187
DNA topoisomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XL73_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 592.0
  • Bit_score: 679
  • Evalue 1.60e-192

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1743
GCAAAGGATGGCGACGAAGAGGCGCGTGTCGAGCGGATTTGGGACAAAATCGCCGCGGACGAAATTAAGAACCGTTGTCTCGGTAAAACAGGGATTGCGACGGAAGAACGCAAACCAACAACCCAAGCGTCGCCATTGCTTTATGATCTCACCAGTTTGCAGCGAGAAGCGAACGCTCGCGGGTTCAGCGCAAAACGCACGCTCCAAATCGCACAACAGCTTTACGAGCGTTTCAAGGTGATCACATATCCGCGCACTGATTCCCGCTACTTGCCGGAAGATTATCTCCCGACTGTACGATCGACGTTGGGCAAGATCGACAATCAATTTGCGCGCAAAGCGCTGGATAATGGCTGGGTCAAACCGTCGAAGCGGATTTTCAATAATGCAAAAATCTCCGATCACTTTGCGATTGTCCCGAGTGGGCAGGCGCCTCACGGACTCGATGAGGCGCAGCAAAAAATCTACGACATGATTGTGCGCCGTTTCATCGCCATCTTTTTCCCGGCAGCGCAATTTGAAGTGACCACTCGCATCACGCGCGTCGAAAAAGATGCATTCAAGAGCGAAGGGAAAATTATGAAGGAGCCCGGCTGGCTCGAGGTTTACGGGCGCGAAGCACCCACTGACGACCAGGGCGGACAATCACTTGTCGCAATCTCCGAGAACGAACGAGCGAAAGTCCTCGATGTCGATGTAGCGCAAAGCGAAACGAAACCACCTGCACGTTTCAACGAAGCGACCCTGCTCTCTGCGATGGAAGGCGCGGGCAAGTTGGTCGAAGACGAAGAATTGCGCGACGCCATGCGGGAGAAAGGCCTTGGGACGCCCGCCACCCGCGCGGCCATCATCGAGGGTCTGATTTCACAAGGTTACGTCATTCGACAGGGCCGCGACCTGATCGCGACGGCAAAGGGCATGGCCCTGATCACATTATTGCGCGGCATCGGAGTGACCGAGCTTTGCTCTCCGGAGATGACCGGTGAGTGGGAGTACAAGCTCAAGCGCATGGCCAAAGGCGCGATGAAACGCAAGGAATTCATGGCGCAGATCAGGCAATTCACTCGCGAGATTGTCGAAAAGACAAAGAACTTCGAAGGCGACAGCGTCAGTGGCGACTTCGAAACGCTGGAAGTGAAGTGTCCGAAGTGCGGCGCCGGCCCATTCGACGAAGATTACCGGACCTTTAAATGCCGGTCGTGTGGCTTGATTATCTGGAAGACAATGGCTGGCCGGCTATTTGAGACCGGAGAAGTTGAGCAACTTCTCACACAAGGACACGTTGGTCCGCTCGAAGGATTCCGCAGCAAAATAGGGCGCCCCTTTAACGCAACCGTAAAACTGAGCGAAGATTTCAAACAGGAATTCGACTTCGGCGAGGGCGGAAATGGCGCACCCGAAAAGATCGATGCGTCGCGACACGAGTCCATCGGCATCTGTCCAGTGTGCAAGGAGGGCCAGGTTTTCGAGGTGGAGAATGCCTATATTTGCGAGCGAGCTGCCGCCGTGCCGAAGAAGTGCACCTTTCGCGTAAGCAAAACAATTTTGCATCGAGCCATTCCAAAAGAGCAGGTGCAAAAACTGATGGCCACCGGCAAGACCGATCTCCTGCCAAGGTTTATCTCAAAAAAGGGACGGCCGTTTTCCGCTCATTTGAAACTCGAAAACGGTAAGATCGGATTCGAGTTTGCGGAAAAAACGCCCCGCACCAAAAAGCCGCACAAAGTGGCTACTGGGCGTTAG
PROTEIN sequence
Length: 581
AKDGDEEARVERIWDKIAADEIKNRCLGKTGIATEERKPTTQASPLLYDLTSLQREANARGFSAKRTLQIAQQLYERFKVITYPRTDSRYLPEDYLPTVRSTLGKIDNQFARKALDNGWVKPSKRIFNNAKISDHFAIVPSGQAPHGLDEAQQKIYDMIVRRFIAIFFPAAQFEVTTRITRVEKDAFKSEGKIMKEPGWLEVYGREAPTDDQGGQSLVAISENERAKVLDVDVAQSETKPPARFNEATLLSAMEGAGKLVEDEELRDAMREKGLGTPATRAAIIEGLISQGYVIRQGRDLIATAKGMALITLLRGIGVTELCSPEMTGEWEYKLKRMAKGAMKRKEFMAQIRQFTREIVEKTKNFEGDSVSGDFETLEVKCPKCGAGPFDEDYRTFKCRSCGLIIWKTMAGRLFETGEVEQLLTQGHVGPLEGFRSKIGRPFNATVKLSEDFKQEFDFGEGGNGAPEKIDASRHESIGICPVCKEGQVFEVENAYICERAAAVPKKCTFRVSKTILHRAIPKEQVQKLMATGKTDLLPRFISKKGRPFSAHLKLENGKIGFEFAEKTPRTKKPHKVATGR*