ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

OR_07242016_12_scaffold_191_4

Organism: OR_07242016_12_Bacteroidetes_43_9

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 2800..3867

Top 3 Functional Annotations

Value Algorithm Source
Filamentation induced by cAMP protein fic bin=GWF2_Bacteroidetes_33_38 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 351.0
  • Bit_score: 430
  • Evalue 1.00e-117
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 340.0
  • Bit_score: 280
  • Evalue 6.40e-73
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 351.0
  • Bit_score: 432
  • Evalue 5.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1068
ATGCTTACCCCAAAGCTAGATTTTGATAGTAAGGCCATGCAAAAGGTAATCCAATCAATCGGGAAGATTGATGCTTTTAAAGGAAGATGGGGGAGCATTGAAAACAAAAGTGACCGCTACTTGAGAGAACTGAGAAAGATAGCTACCATTGAAAGTATCGGTTCATCAACTAGGATAGAGGGAGCTGTGTTAACAGATGAAGAAGTTCAGCATCTGGTAAATAACATCAAGGTTACAGAATTCAAAAGCAGGGATGAAGAGGAAGTGTTCGGCTATTACGAAGCACTGGATATTATTTTAGATAATGCATCCAGCATTGAATTGTCGGAATCCTACATTCTGCAACTCCACACCATACTACTAAAGTATAGCAGCAAAGACCAAAGACATAAAGGCGCATATAAAAACCTGCCCAACTCTGTTGTTGCCAACTACCCTGATGGGAATCAAAGAACGATATTCAATACAACTGCACCACACCTTACACAAAAGGAAATGCAGGAAATGCTTGATTGGGTAAACACATCTATACAGCAATCATCTGTTCACCCATTATTGGTTATCGGGTTATTTGTTTATGAGTTCTTATCTATCCATCCTTTTCAGGATGGTAACGGCAGGTTATCCCGTTTACTGACTACACTATTATTATTGAAGAGTGGATATGAATTTGCACAATACATATCATTTGAACATATTATCGAGGAGAGAAAAAAAGAATACTATCAAGTATTGATGCACGATCAACAGAACAGAGGAACTGATAAAGAAATTATCAGCGAATGGATCTTGTTCTTTTTAAGCAGTCTTGAAATATTGATAGAGAAGCTGGAAAATAAATATACTTCATATAAAGAACGTGGTAACTATACCAACGAAAGACAACGGCAGATCATACAGTTTATTGAAACGAAACAGCCTGTTAAATTGAATGACATTGTAAAAGGATTTCCTGACCTTTCCATTCACACAATTAAAAAGGATCTGCAGTTATTGGTACAGCTACAAATGATCAGTAAAGCAGGTGAGAAGAAAGGAACAGTGTATGTGAAGTTGATAAACAAATAG
PROTEIN sequence
Length: 356
MLTPKLDFDSKAMQKVIQSIGKIDAFKGRWGSIENKSDRYLRELRKIATIESIGSSTRIEGAVLTDEEVQHLVNNIKVTEFKSRDEEEVFGYYEALDIILDNASSIELSESYILQLHTILLKYSSKDQRHKGAYKNLPNSVVANYPDGNQRTIFNTTAPHLTQKEMQEMLDWVNTSIQQSSVHPLLVIGLFVYEFLSIHPFQDGNGRLSRLLTTLLLLKSGYEFAQYISFEHIIEERKKEYYQVLMHDQQNRGTDKEIISEWILFFLSSLEILIEKLENKYTSYKERGNYTNERQRQIIQFIETKQPVKLNDIVKGFPDLSIHTIKKDLQLLVQLQMISKAGEKKGTVYVKLINK*