ggKbase home page

OR_07242016_12_scaffold_1222_2

Organism: OR_07242016_12_Bacteroidetes_43_9

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(2023..3561)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-L-arabinofuranosidase domain protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK80_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 510.0
  • Bit_score: 778
  • Evalue 3.80e-222
alpha-L-arabinofuranosidase similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 510.0
  • Bit_score: 778
  • Evalue 1.10e-222
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:AEI49750.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 510.0
  • Bit_score: 778
  • Evalue 5.30e-222

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAAAAAACAAATCCTGATCGCTATGGCATTTTGCTGCAGCGTCTCCTTATTCGCACAAAACAATATCCAGTTGTTTGCTGATAAAGGCAAAGACATCATCAACCGGAATATTTACGGTCATTTTGCCGAACACCTGGGTCATTGTATTTACGGCGGCTTTTACGTAGGTGAAAACAACCAGCTGATACCCAATAAAGACGGCGTACGCCTCGATGTGATCAATGCCCTGAAAAAATTAAAAGTGCCCGTACTTCGCTGGCCCGGTGGTTGTTTTGCTGATACCTATCACTGGAAGGATGGTATTGGGCCCAAGGACCAGCGTCCATCCATGTTGAATGTTTGGTGGGGTAATGTAAAAGAAGACAACAGCTTTGGCACCAATGAGTTCCTGAATATGTGTGAATTGCTGGGTGCCGAACCATATCTGAGCGGAAATGTAGGTAGCGGAACACCGCAGGAACTATCAGACTGGGTAAAATATACGGATCATCCCAATGGAAGCAGCCCGATGACGGATTTGAGACAGAAAAACGGAAGACCCAATCCCTGGCATGTAAAATACTGGGGAATCGGAAATGAAGCCTGGGGTTGTGGCGGAAATATGCAGCCGGAATATTATGCCAATGTATACCGCCGGTATGCCACATTTATGTCGAATGGTGGCGGTGAAAAAATATTTAAGATCGCATCGGGTGCGAGTGATGCGGATTATCACTGGACAGAAGTGCTGATGCGGGATATACCGCATAATATGCTGGATGCAGTGGCCTTGCACCATTATTCCGTAATCAACTGGGGTAAAAAAGGGCCGGCAACAAATTTTACGGAGGAAGATTATTTCACAACCATGCAACGAGCATTGCAAATGGAAGAACTGGTTGTGAAACACAGCGCCATCATGGATAAATATGATCCCAAGAAACATGTTGCCTTAATTGTAGACGAATGGGGAGGCTGGTATGATGTGGAGCCGGGAACCAATGGGGCTTTCCTGTATCAGCAAAACACCATGCGCGATGCGATGATTGCAGGTACTACCTTAAATATCTTCAATAATCATTGCGATCGTGTCCGAATGGCGAATCTCGCACAGATCATAAATGTATTACAGTCCGTAATTCTCACCCATGATGAAAAAATGATCCTGACACCTACTTACCATGTAATGGAAATGTATAATGTACACCAGGATGCCACCCTGATTCCCCTATCCGTTACCAGTAATGATTACAAAATGGGCAAAGAAAAACTAAAAGCGATTTCTGCCTCTGCTTCGATTGATAAGAATGGATTAACCCATATTTCACTGGTGAATATCGATTATTCCAAACCTCAGCAACTGACCATCGATATCAGTGGCAAAAAATACAGTTCTGTAAGTGGCAGGATACTCACTTCAGATAAGATCCAGAATTACAACAGCTTTGACCATCCGGAGAACATAAAACCAGCAACCTTTTCAGGTGCATCGCTGGAAGGCAATGACCTGACACTTACCATCCCACCATTTTCAGTTGTGGTTTTGGAAATAAAATAA
PROTEIN sequence
Length: 513
MKKQILIAMAFCCSVSLFAQNNIQLFADKGKDIINRNIYGHFAEHLGHCIYGGFYVGENNQLIPNKDGVRLDVINALKKLKVPVLRWPGGCFADTYHWKDGIGPKDQRPSMLNVWWGNVKEDNSFGTNEFLNMCELLGAEPYLSGNVGSGTPQELSDWVKYTDHPNGSSPMTDLRQKNGRPNPWHVKYWGIGNEAWGCGGNMQPEYYANVYRRYATFMSNGGGEKIFKIASGASDADYHWTEVLMRDIPHNMLDAVALHHYSVINWGKKGPATNFTEEDYFTTMQRALQMEELVVKHSAIMDKYDPKKHVALIVDEWGGWYDVEPGTNGAFLYQQNTMRDAMIAGTTLNIFNNHCDRVRMANLAQIINVLQSVILTHDEKMILTPTYHVMEMYNVHQDATLIPLSVTSNDYKMGKEKLKAISASASIDKNGLTHISLVNIDYSKPQQLTIDISGKKYSSVSGRILTSDKIQNYNSFDHPENIKPATFSGASLEGNDLTLTIPPFSVVVLEIK*