ggKbase home page

GWB1_scaffold_2173_1

Organism: GWB1_OD1_43_20

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: 27..3185

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 999.99
  • Bit_score: 1143
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=GWC1_OD1_42_11 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2074
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1142
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_42_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3159
ATGCGAGAACAGAAACATTTTGCGCGCTACAAGAAGCCGCAAGTAGAGATGCCTAACCTTGTGGAGACACACTTGAAGTCATACAAATGGCTCCTCGAAACAGGACTCAAAGAAGCATTTAAAGAATTTTCCCCTATTGAAGATTATTCAGGGAAAAAGTTTGCACTCGAATTCGTTGGCATTGAACTTTCAGCGCCAAAGTACGACGAGTATTTTGCAAAAGAAAACAACCTCTCTTACGAGGCTCCTCTCAAGGCGCGCGTAAAACTTATAAACAAAACATTTAAGAGTGAAAAGGAACAGGAAATCTTTATGGCAGATTTCCCTATGATGACCTCGCACGGTACATTTATCGTGAACGGGGTTGAACGCGTGGTTGTGCCACAGATCTCTCGTTCGTTCGGCGTGTCGTTCACTGTAGATGAGCTCAAAGGAAAGCGTTATTTTGGCGCAAAGATTATCCCTGGACGTGGAGCATGGGTAGAAATAGAGTCTGACCCAGATGGAGCTGTGTATGTACGCATCGACAAGAAGCGCAAGTTCCCTGTGACTGTGCTTCTTCGCGCGCTTGGTGCAGAAACAAACGAGGAGATTCTAAAGGCTTTTGCAAAAGATGAGAATGCAAAAAAGGTTATTGAGACAACTCTCGCAAAGGACATAGCAAAAACTCCCGACGAGTCATTCATCGAAATTCACAAGAAGCTTCGCGATGGCGACCTTGCAACAGCAGAAAATGCTCGTGGTTTCGTGAACTCTATTTTTGCAAAGGAGAAGTATGACCTTTCAGAAGTGGGACGCTTCAAGTTTAACAAGCGTTTTGGAAAGGGTCTTGAGAAGGCTGATATTGCAAGACGCACAATTGACGCAAGTGATGTTGCGGCAATCGTTGGACAGATTGTGAAACTTAACGCTGACCCACGTTCTCTTCCAGACGACATTGACCACTTGGGTTCACGCCGTATTCGTTCGGTAGGTGAAATGCTTCAGCAGAAAATCCGGGTTGGTATGACACAGATGAAGCGTAACATTCAGGACAGAATGTCGACTATCGACACCGACGCTACAATGCCTGTGAATTTTATTAGCCCTCGTCCACTTCAGGCTCGTCTCAAGGAGTTCTTTGCGACAAACCAGCTTTCGCAGTTCATGACGCAGTACAATGTGCTTTCAGAAATTGAGAGCCTCCGTACATTCTCTGCTCTTGGGCCCGGTGGTCTTACACGCGAGCGCGCAGGTATTGAGGTTCGTGACGTGCATACATCGCACTACGGACGCCTTTGTCCTATTCACACTCCAGAAGGCCCAAACATCGGTCTTATCCTCCGCCTTTCCTGCTATGCTCGTATCAATGATTTCGGCATGATTGAAACCCCATACGCAAAGGTAAAGAATGGCAAAATCACAAAGGAAATCATTTATATGGATGCGCTCGAAGAAGAGCAGTACAATATTGCGCACGCATCTCTAAAGATGGATGGCGACCAAATCGTTGAAGAAAAAGTGGAGGTTCGTCGCGCTGGACATCCAGAGCTTGTAGCCCGTGCTGATGTGCACTATATGGACATCGCAGCAAACCAGGCATACTCTGTGGCAACATCAATGATCCCATTCCTCGAACACGACAACGCAAACCGCGCACTCATGGGTTCAAACATGCAAAAGCAGGCAATCCCTTGTGTTATTCCTGAGGCGCCTCTTGTTGCTACTGGCATGGAGGGGGCTGCAGCTCGTGATACAGGTCGCCTTATTATTGCGGAAATGGACGGCACTATTACTCATTCAGATTCAAGAAAAATTGTTCTTAAAGATGAGAATAGCAAAGATCATACATACAACCTCGTAACATTTTCTCGCACAAACGGTTTCACTGCGTTTCATCAGCGTCCTATCGTAAACGTCGGTGATAAGGTAAAGAAAGGCACAACTCTCGCAGACACTTCATCATCAGACAAGGGTCAGATTGCGCTTGGACAAAACGCACTTGTGGCATTTATGTCATGGGCAGGTAGCAACTACGAAGACGCTATTATTCTCTCTGAGCGTCTTGTAAAAGACAGCAAGTTCACATCCATTCACATGGATGAGTTTGTAGTAAACGTGCGCGACACAAAGCTCGGGCCCGAGGTTACAACTCACGATATTCCAAATGTTGGAGAGCTAAAGTTGAAAGACCTAGACGAAGACGGAATCATCCGTATTGGCGCAGAGGTGCATCCAGGAGATATTTTGGTTGGCAAGATTACACCAAAGGGTGAAACAGAGCTTACTCCAGAAGAGCGACTCCTTCGTTCTATTTTTGGAGACAAGGCGCGCGATGTGAAAGATACCTCACTTCGAATGGATCACGGCAAGCGCGGTCGCGTTATTGGAGTAAAAGTATTCTCACGTGAAAAAGGTGACGCACTCGACAGTGGTATCATCAAGAAAATTCATATTGAAGTTGCGCAGGTACGTAACATTTCTGTTGGTGACAAACTCGCAGGACGTCACGGTAACAAAGGCGTTATATCGGTGATTCTTCCAGAGGAAGACATGCCATACATGGCAGACGGCACTCCAATCGATGTCGTTTTGACGCCACTCGGTGTGCCTTCTCGTATGAACCTTGGTCAGATTCTTGAGCTTCACCTTGGTTTAGCAGCAAACACTCTTGGTTATCAGGCAATCGTTCCTCCATTTATGGGGGCAACTGTTGATGAAATCAAAGGTGAGCTTGTAAAGGCTGGATATCGTGAGGATGGCAAGATGAAGCTTTTTGACGGGCGCACAGGTGATAGTTTTGACCAGGATATTGCAGTAGGGTACATGTATATTTTGAAACTAAACCATATGGTTGAAGACAAAATTCACATGCGTTCAGTTGGACCGTACTCTCTCATTACACAGCAACCTCTTGGTGGAAAGGCGCAGGGTGGAGGTCAGCGTTTTGGAGAAATGGAAGTGTGGGCTCTCGAAGGATACGGCGCATCAAACGTTCTTCGCGAAATGCTCACGGTAAAGTCGGACGACATTACAGGGCGTTCAGAGGCATTTGATTCTATTGTGAAAGGAAATGATGTTGTCAACACAAATATTCCTGAGTCATTCAATGTGCTCCTAAATTATCTACGCGGGCTCTCACTCGATATATCACTCTTGAAAAAGGGAGAGAACAAATAA
PROTEIN sequence
Length: 1053
MREQKHFARYKKPQVEMPNLVETHLKSYKWLLETGLKEAFKEFSPIEDYSGKKFALEFVGIELSAPKYDEYFAKENNLSYEAPLKARVKLINKTFKSEKEQEIFMADFPMMTSHGTFIVNGVERVVVPQISRSFGVSFTVDELKGKRYFGAKIIPGRGAWVEIESDPDGAVYVRIDKKRKFPVTVLLRALGAETNEEILKAFAKDENAKKVIETTLAKDIAKTPDESFIEIHKKLRDGDLATAENARGFVNSIFAKEKYDLSEVGRFKFNKRFGKGLEKADIARRTIDASDVAAIVGQIVKLNADPRSLPDDIDHLGSRRIRSVGEMLQQKIRVGMTQMKRNIQDRMSTIDTDATMPVNFISPRPLQARLKEFFATNQLSQFMTQYNVLSEIESLRTFSALGPGGLTRERAGIEVRDVHTSHYGRLCPIHTPEGPNIGLILRLSCYARINDFGMIETPYAKVKNGKITKEIIYMDALEEEQYNIAHASLKMDGDQIVEEKVEVRRAGHPELVARADVHYMDIAANQAYSVATSMIPFLEHDNANRALMGSNMQKQAIPCVIPEAPLVATGMEGAAARDTGRLIIAEMDGTITHSDSRKIVLKDENSKDHTYNLVTFSRTNGFTAFHQRPIVNVGDKVKKGTTLADTSSSDKGQIALGQNALVAFMSWAGSNYEDAIILSERLVKDSKFTSIHMDEFVVNVRDTKLGPEVTTHDIPNVGELKLKDLDEDGIIRIGAEVHPGDILVGKITPKGETELTPEERLLRSIFGDKARDVKDTSLRMDHGKRGRVIGVKVFSREKGDALDSGIIKKIHIEVAQVRNISVGDKLAGRHGNKGVISVILPEEDMPYMADGTPIDVVLTPLGVPSRMNLGQILELHLGLAANTLGYQAIVPPFMGATVDEIKGELVKAGYREDGKMKLFDGRTGDSFDQDIAVGYMYILKLNHMVEDKIHMRSVGPYSLITQQPLGGKAQGGGQRFGEMEVWALEGYGASNVLREMLTVKSDDITGRSEAFDSIVKGNDVVNTNIPESFNVLLNYLRGLSLDISLLKKGENK*