ggKbase home page

LAC_NA06_curatedSub20_scaffold_249_5

Organism: LAC_NA06_sub_Chloroflexi_61_22_curated

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(3745..7656)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 1305.0
  • Bit_score: 2033
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 1297.0
  • Bit_score: 2132
  • Evalue 0.0
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 1302.0
  • Bit_score: 2348
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Chloroflexi_57_15_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3912
ATGGCATCCTCTTTGCCCCAGAAAAATTACGCGCGTATTCCAGTGAACCTTGGTCTTCCCAATCTGATCGAGGTTCAACTTGACTCTTTCGAGCGCCTGAAAAAGGAAGGGTTGGGGGACCTCTTCCATGAAATTTCCCCGATCGAATCCTACAACAAGGGGATGAAACTTTTTTTCCCCAGCCGCAGCCCCGAATCCAAACAATGGGGATTGAAGTACTGGTTCGGCGATCCGAAACATTCCATCGAAGAATGCGTCGAGCGGGACCTCACCTACGCCAGCCCGTTGTACGTTTCCGTCCTGCTGGCGGGGCCCGACGTTCCCGAGCCGATCAAGCAGGATATTTTCCTCGGCGATTTCCCCGAGATGACCGATAAGGGGACTTTCATCATTAACGGGACGGAGCGCGTTGTCGTCTCGCAGCTGATCCGCTCCCCGGGCGTCTATTTCGAAGCCCCCACCGACCGCGCCACGGGCCGCCCGCTGGCGATGGCGAAACTCATCCCCGACCGCGGCGCGTGGATGGAATTTGAAACGCGCAAATCCGATTACATCATCCTGAAATTCAACCGCAAACGCACTGTGCCGATCACGGTGTTTCTCCGCGCCCTGGCAGCAGTCGGCGATGGGATGCCGGAGTCGCTCCTGAAGACCGGCTCAGACGAAGAGATCATCGCGCTGTTCCAGGATGTGGATAACAATCCCGAACGCATGTTCCTCGCGTCCACGTTCCACCAGGAGCCGGAGTGGGATTTGACCGGCGGCAAGACCATTGCCGAAGCCGCCCTGATCGAATTCTTCAAAAAGATGCGCCCCGGCGATCCTGCCACATTGGACAACGCCAAGGCCTTTCTCGAAGAGCAGCTCTTTGACCAGCGTCACTACGACCTCGAGCGCGTCGGCCGCTATAAACTGAACCAGAAACTGGATCTCCAGATCCCCATCCCGCACCGCACCGTCACCAAGAACGATATCATCCGCCTCATCCGCCGCATGGTCCTGATCAACAACGGCGTCGAGCGCTCGGACGACATTGACCACCTCGGCAACCGCCGCGTCAAGACCGTCGGCGAATTGATCCAGAATAAACTCCGCATCGGCCTGCGCCGCATGGAACGCGTCATTAAAGAGCGCATGTCCATCCGCGACCAGGAGCAGTTATCGCCCGTCACATTGGTCAACATCCGGCCGGTCGTGGCGGCCTTGCGCGAATTCTTCGGCTCCAGCCAGTTGAGCCAGTTCATGGACCAGACCAACCCGCTGGCAGAATTGCGTCACAAACGGACGCTCTCCGCGCTCGGTCCGGGCGGCCTGCGGCGTGAACGCGCGGGCTTCGACGTCCGCGACGTGCACCATTCCCACTATGGACGCATCTGCCCCATCGAGACTCCCGAAGGCCCCAACATCGGCCTGATCGGACGTCTGGCGTCGTTCTCGCGCGTGAACGAGTACGGTTTCATTGAAACTCCCTACCGTAAGGTCATCAAGTCCCTGCCGTGCGACGACGAACGGCTGGAAGGACGCGCCCTGCGCGGCGACGCGCAGGACGCCAAAGGGAACGTGATCGGGAAGAGCGGGGAGCGCGTCACGGCTAAAATGGCGAAGGCGCTGGCGAAGGTCGGCGGAGAGATTTCCATCGTCCCCTTTGTCTCCGACCAGGTGGATTATTTGTCCGCCGACGCGGAGGACAAATACGTGATCGCGCAGGCCAACGCGCCCCTGACAGACGAAAACGAATTCGTCCGCGAGCGCATTTCCTGCCGCTACCACTCGGGCTTTCTGTTCCAGACCTCGAGCAATGTGGACTATATGGACGTCGCCCCGCACCAGGTGGTCGGCATCAGCGCGGCGCTCATCCCCTTCCTCGAACACGACGACGCCAACCGCGCCCTGATGGGGTCGAACATGCAGGCCCAGGCAGTGCCGCTCGTGCGCCCCGAAATTCCGACGGTCTCCACCGGCATGGAATATCATGCCGCGTTGGACTCGGGCCAGGTCATCGTCGCTCTCGAAGACGGGGAAGTGGTTTCAGTGACCGGCAGCACGATCACCATCAAAGAGAAAAAGGGATCGCGCACCTATCAGCTGCGGAAGTACCAGCGCTCCAACCAATCCACCTGCATTGACCAGCGCCCGGCTGTGGTGAAGGGGCAGATCGTCAAGCGCGGCGACATCATCGCCGATTCCTCCTCGACCGAAAGCGGCGAACTCGCCCTCGGCCAAAACGTGACCGTGGCGTTCCTCTCCTGGGAGGGCGGCAACTTCGAAGACGCCATCCTCATCTCCGAGCGGCTCGTCCAGGAAGACCGTTTCACCTCGGTGCATATCGAGAAGTACGAGGTCGAAGCCCGCGACACGAAGCTGGGTCCCGAAGAGATCACGCGCGACATCCCCAACGTCGGCGAAGACGCGATCAAAGACCTCGACGAGAACGGCATCATCCGCATCGGCGCGGAAGTCGGCCCGAACGACATCCTGGTCGGCAAGATCACCCCGAAAGGCGAAAAAGAACTGACGCCCGAAGAGCGTCTCCTGCGCGCCATCTTCGGCGAGAAATCCCGCGACGTGAAAGACACCTCCCTGCGGATGCCGCACGGCGAGCGCGGCAAGGTGGTGGACGTGAAGGTCTTCACCCGCGAAGAAAACACCGATCTCTCGGCGGGCGTGGACATGATGGTGCGCGTCTCTGTGGCGCAGCGCCGCAAGATCACCGCTGGCGATAAAATGGCCGGCCGTCACGGCAACAAGGGCGTAGTGTCCAAAGTTGTGCCGGTGGAGGATATGCCCTTCCTTGAAGACGGCACGCCCGTTGACCTCATTCTAAATCCGTTGGGCGTGCCTGGGCGTATGAACATCGGACAGGTGCTGGAAGTCCACCTGGGCTGGGCTGCGAAGCGACTCGGCTACCGCGCGGTGACGCCCGTCTTCGACGGCGCGTCCGAATCGGAGATCGAAGCCGAACTCGCCCGCGCCTGGATCGTGGACGCGGCCTGGAAGGACGCGTCTGCCGCCGCCTGGGACTGGATCAAGGAACAGGAATACGACCCGGATTCGATCCAGGACGACGACGAGGTGCGCGCTCTCTATCTGAAAGAACGGCTTGGCGAACGCGGCTATAAATCCCGCCGCCTGCACGAAGAGGACTATGTCCGCCAATCTGCGGCCCGCGAGTGGCTGGTCGACCGCGATTACGATCCCGATCAGGTCTTCGGCGCGGACGATGAAATTGCCTATCGCCGCAAGCCGGAGCGCGACGACTATACCATCCGCGCCTGCCTGCGGATCTGGATGGACTCGCTCGGTTATTCCAAAAAAGTGGCCGACGATAAAGTCCGCGAGGCCGCGCAGGAAGTAATGCAGGCGAGCGGCTCCCCGATCCCGACCCTCGGCAAGTTGGTTCTGCGCGACGGGAAGACGGGCATTCCCTACGACCAGCCCGTGACGGTGGGTGTGATGACCATCCTTAAACTCCACCACCTGGTCGAAGACAAAGTCCACGCGCGCTCCACGGGGCCCTACAGTCTCGTGACCCAGCAGCCGCTCGGCGGCAAGGCGCAATTCGGCGGACAACGCTTCGGCGAAATGGAAGTATGGGCGCTCGAAGCCTATGGCGCGGCCTATACCCTGCAGGAAATGCTGACGGTCAAGTCGGACGACGTGCAGGGACGCGTCAATACATATGAAGCGATCGTGAAAGGCGAGCCGATTGAAGAGCCGAGCATCCCGGCTTCGTTCCGCGTACTGGTCAAGGAATTGCAAAGCCTCGGCCTGGCGGTGGAGGCGGTCGGCGACGGCGGCGATATGGTCAAGTTTGGCAAGGACGAAGAGAAGACCCATCCGCCGCGTATGGAGACCGGCCTGCTCAACCTGGGCGATCATCTTCCTTCCAAAAAAACCAGCCGGAGTTCTTGA
PROTEIN sequence
Length: 1304
MASSLPQKNYARIPVNLGLPNLIEVQLDSFERLKKEGLGDLFHEISPIESYNKGMKLFFPSRSPESKQWGLKYWFGDPKHSIEECVERDLTYASPLYVSVLLAGPDVPEPIKQDIFLGDFPEMTDKGTFIINGTERVVVSQLIRSPGVYFEAPTDRATGRPLAMAKLIPDRGAWMEFETRKSDYIILKFNRKRTVPITVFLRALAAVGDGMPESLLKTGSDEEIIALFQDVDNNPERMFLASTFHQEPEWDLTGGKTIAEAALIEFFKKMRPGDPATLDNAKAFLEEQLFDQRHYDLERVGRYKLNQKLDLQIPIPHRTVTKNDIIRLIRRMVLINNGVERSDDIDHLGNRRVKTVGELIQNKLRIGLRRMERVIKERMSIRDQEQLSPVTLVNIRPVVAALREFFGSSQLSQFMDQTNPLAELRHKRTLSALGPGGLRRERAGFDVRDVHHSHYGRICPIETPEGPNIGLIGRLASFSRVNEYGFIETPYRKVIKSLPCDDERLEGRALRGDAQDAKGNVIGKSGERVTAKMAKALAKVGGEISIVPFVSDQVDYLSADAEDKYVIAQANAPLTDENEFVRERISCRYHSGFLFQTSSNVDYMDVAPHQVVGISAALIPFLEHDDANRALMGSNMQAQAVPLVRPEIPTVSTGMEYHAALDSGQVIVALEDGEVVSVTGSTITIKEKKGSRTYQLRKYQRSNQSTCIDQRPAVVKGQIVKRGDIIADSSSTESGELALGQNVTVAFLSWEGGNFEDAILISERLVQEDRFTSVHIEKYEVEARDTKLGPEEITRDIPNVGEDAIKDLDENGIIRIGAEVGPNDILVGKITPKGEKELTPEERLLRAIFGEKSRDVKDTSLRMPHGERGKVVDVKVFTREENTDLSAGVDMMVRVSVAQRRKITAGDKMAGRHGNKGVVSKVVPVEDMPFLEDGTPVDLILNPLGVPGRMNIGQVLEVHLGWAAKRLGYRAVTPVFDGASESEIEAELARAWIVDAAWKDASAAAWDWIKEQEYDPDSIQDDDEVRALYLKERLGERGYKSRRLHEEDYVRQSAAREWLVDRDYDPDQVFGADDEIAYRRKPERDDYTIRACLRIWMDSLGYSKKVADDKVREAAQEVMQASGSPIPTLGKLVLRDGKTGIPYDQPVTVGVMTILKLHHLVEDKVHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRVNTYEAIVKGEPIEEPSIPASFRVLVKELQSLGLAVEAVGDGGDMVKFGKDEEKTHPPRMETGLLNLGDHLPSKKTSRSS*