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GWB1_scaffold_342_15

Organism: GWB1_OD1_42_9

near complete RP 41 / 55 BSCG 43 / 51 ASCG 10 / 38 MC: 1
Location: 11896..12486

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB1_FULL_OD1_42_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 385
  • Evalue 3.90e-104
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 183.0
  • Bit_score: 172
  • Evalue 1.40e-40
RNA polymerase sigma-70 factor, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 171
  • Evalue 1.00e+00

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Taxonomy

RIFOXYB1_FULL_OD1_42_16_curated → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAGTAGCCTTCTAACAACAGAAGTGGCAAAGAAAAAAGATGAAGATTTAATCCCGTTGGTTCTGGCCAACTCAGAAGTTTTCGGCGTGATTATTGATCGTTACAACGAAGCTCTCGCTCGCTATATTCGTCGGCTAACCAGAGTGGATGAAGATGAAATTAAAGATATTTTGCAAGAAATCTTCATTAAAATTTATCGCAATCTTAACGATTTTGACCACAGTTTGAAATTTTCTTCTTGGATTTATCGAATTGCCCATAATCAAGTGATCGATTACTGGCGTCGAAGTCGTTCTCGACCGATGACCGCTGTCGATCCCGATGATGGTTTTTGGTCGTCGCTGGCCGATGAATTGGATTTGGAAAAAGAAATTGGGCGTCAGGAATTTGGTTCTCAAGTTCGTCTTTTGATCGACGAGTTGTCTGGGGATTATCGAGCGGTGATCATTCTCCGTTTTTTGGAAGAAAAAGATTATCAAGAAATTTCCGATATTATGAAAAAACCGCTGGGTACGGTGGCGACACTGATCAATCGTGCTAAAAAGAAATTAAAAACATTAGCTGAACAAAAAGGTCTTAGTAATCAATAA
PROTEIN sequence
Length: 197
MSSLLTTEVAKKKDEDLIPLVLANSEVFGVIIDRYNEALARYIRRLTRVDEDEIKDILQEIFIKIYRNLNDFDHSLKFSSWIYRIAHNQVIDYWRRSRSRPMTAVDPDDGFWSSLADELDLEKEIGRQEFGSQVRLLIDELSGDYRAVIILRFLEEKDYQEISDIMKKPLGTVATLINRAKKKLKTLAEQKGLSNQ*