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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 301-330 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_295
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(343580..344746)
-----------------
DNA (1167bp)
protein (389aa)
alias=gwe2_scaffold_136_199 id=7201263 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
ERMGT100_2_curated_scaffold_1_296
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(344822..346372)
-----------------
DNA (1551bp)
protein (517aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1H1_POLGS id=5223362 bin=16ft_combo_ws3_JS1 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_297
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(346392..347930)
-----------------
DNA (1539bp)
protein (513aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IF97_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
ERMGT100_2_curated_scaffold_1_298
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(347927..349003)
-----------------
DNA (1077bp)
protein (359aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFD4_METPE id=5223363 bin=16ft_combo_ws3_JS1 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
UDP-N-acetylglucosamine 2-epimerase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_299
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(349000..349869)
-----------------
DNA (870bp)
protein (290aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Dolichol-phosphate mannosyltransferase n=1 Tax=Rhodopirellula europaea 6C RepID=M2AL04_9PLAN
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
ERMGT100_2_curated_scaffold_1_300
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(349866..351197)
-----------------
DNA (1332bp)
protein (444aa)
hypothetical protein VspiD_09550 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744DD0 id=5223364 bin=16ft_combo_ws3_JS1 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_301
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

351381..352349
-----------------
DNA (969bp)
protein (323aa)
Polysaccharide deacetylase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKC3_HALO1 id=5223367 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
polysaccharide deacetylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_302
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

352444..353784
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39ZD7_GEOMG id=5223368 bin=16ft_combo_ws3_JS1 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_303
unknown

Not on your lists

353790..354185
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_304
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

354243..356333
-----------------
DNA (2091bp)
protein (697aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT id=5223369 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
uvrB; UvrABC system protein B
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_305
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

356336..357229
-----------------
DNA (894bp)
protein (298aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6J4_SPHTD id=5223370 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_306
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

357222..358046
-----------------
DNA (825bp)
protein (275aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAE0_ANADF id=5223371 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_307
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

358043..358867
-----------------
DNA (825bp)
protein (275aa)
Sec-independent protein translocase protein TatC n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T572_THEA1 id=5223372 bin=16ft_combo_ws3_JS1 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Sec-independent protein translocase subunit TatC
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_308
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

358860..359657
-----------------
DNA (798bp)
protein (266aa)
Type III pantothenate kinase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1G9_DESAP id=5223373 bin=16ft_combo_ws3_JS1 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Baf family transcriptional activator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_309
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

359639..361381
-----------------
DNA (1743bp)
protein (581aa)
id=5225050 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_310
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

361528..361983
-----------------
DNA (456bp)
protein (152aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMGT100_2_curated_scaffold_1_311
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

362082..363875
-----------------
DNA (1794bp)
protein (598aa)
Peptidase M28 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V5_SOLUE id=5223374 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M28
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_312
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

363875..364981
-----------------
DNA (1107bp)
protein (369aa)
WD40 domain protein beta Propeller n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF id=5223375 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
WD-40-like beta propeller repeat-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_313
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

364972..366699
-----------------
DNA (1728bp)
protein (576aa)
id=5225050 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_314
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

366800..368314
-----------------
DNA (1515bp)
protein (505aa)
chaperonin GroEL n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174586A id=5223376 bin=16ft_combo_ws3_JS1 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
heat shock protein groEL
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_315
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(368318..369181)
-----------------
DNA (864bp)
protein (288aa)
Folate-binding protein YgfZ n=5 Tax=Arthrospira RepID=B5W2U1_SPIMA id=5223384 bin=16ft_combo_ws3_JS1 species=unknown genus=Arthrospira taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycine cleavage system protein T
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_316
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

369331..372201
-----------------
DNA (2871bp)
protein (957aa)
peptidase M16 n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4927C
peptidase M16 domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMGT100_2_curated_scaffold_1_317
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

372218..373300
-----------------
DNA (1083bp)
protein (361aa)
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
N-succinyl-L,L-diaminopimelate desuccinylase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9KBC6_9DELT id=5223385 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_318
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

373381..374475
-----------------
DNA (1095bp)
protein (365aa)
Aminotransferase class I and II n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHC6_ANADF id=5223386 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
class I and II aminotransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_319
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

374472..375302
-----------------
DNA (831bp)
protein (277aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXK2_HALO1 id=5223387 bin=16ft_combo_ws3_JS1 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_320
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(375497..377080)
-----------------
DNA (1584bp)
protein (528aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YY51_METPS
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
ERMGT100_2_curated_scaffold_1_321
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(377077..377961)
-----------------
DNA (885bp)
protein (295aa)
ABC transporter ATP binding protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YY50_METPS
ABC transporter ATP-binding protein
ABC transporter ATP binding protein {ECO:0000313|EMBL:BAI61372.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
ERMGT100_2_curated_scaffold_1_322
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(377987..381385)
-----------------
DNA (3399bp)
protein (1133aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034549DC
amidohydrolase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_1_323
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

381592..381948
-----------------
DNA (357bp)
protein (119aa)
dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] id=24469774 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
folB; dihydroneopterin aldolase FolB
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_324
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

381945..382436
-----------------
DNA (492bp)
protein (164aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] id=24469773 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermus aquaticus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 301-330 of 416 in total

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