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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 151-180 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_151
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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176573..177490
-----------------
DNA (918bp)
protein (306aa)
N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Rhodothermus marinus RepID=D0MGR0_RHOM4 id=5224370 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RpiR family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_152
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

177487..178710
-----------------
DNA (1224bp)
protein (408aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J7U1_MARPK id=5224369 bin=16ft_combo_ws3_JS1 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sugar ABC transporter substrate-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_153
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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178719..179591
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFS3_9BACT
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Zixibacteria_48_11_curated
ERMGT100_2_curated_scaffold_1_154
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

179588..180424
-----------------
DNA (837bp)
protein (279aa)
Multiple sugar transport system permease protein n=1 Tax=uncultured Chlorobi bacterium RepID=H5SGL8_9BACT
binding-protein-dependent transport systems inner membrane component
Tax=BJP_IG2158_Zixibacteria_48_33
ERMGT100_2_curated_scaffold_1_155
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

180421..181662
-----------------
DNA (1242bp)
protein (414aa)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J5_THERP id=5224368 bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_156
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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181659..183020
-----------------
DNA (1362bp)
protein (454aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT id=5224367 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_157
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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183853..184677
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000376BABF
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
ERMGT100_2_curated_scaffold_1_158
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(184700..185515)
-----------------
DNA (816bp)
protein (272aa)
Methyltransferase type 11 n=3 Tax=Anaeromyxobacter RepID=B4UMH7_ANASK id=5223738 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
type 11 methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_trna_1
unknown

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185654..185727
-----------------
DNA (74bp)
transferRNA Asp
ERMGT100_2_curated_scaffold_1_159
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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185986..186225
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00035FE527
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_160
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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186298..187182
-----------------
DNA (885bp)
protein (295aa)
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] id=24529126 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative agmatinase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_161
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

187191..188375
-----------------
DNA (1185bp)
protein (395aa)
SAM-dependent methyltransferase, PUA domain-containing n=2 Tax=Geobacter sulfurreducens RepID=D7AL01_GEOSK id=5224362 bin=16ft_combo_ws3_JS1 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
SAM-dependent methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_162
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(188372..188665)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein id=24529122 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_163
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(188662..189462)
-----------------
DNA (801bp)
protein (267aa)
MazG family protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3F4_METSZ id=5224358 bin=16ft_combo_ws3_JS1 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_164
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(189504..190385)
-----------------
DNA (882bp)
protein (294aa)
Putative uncharacterized protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJG7_CORAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE54566.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
ERMGT100_2_curated_scaffold_1_165
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190382..190975)
-----------------
DNA (594bp)
protein (198aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QN39_BRESC
Putative transmembrane protein {ECO:0000313|EMBL:AKF07112.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
ERMGT100_2_curated_scaffold_1_166
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

191074..192306
-----------------
DNA (1233bp)
protein (411aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase id=3513694 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_167
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

192308..193156
-----------------
DNA (849bp)
protein (283aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] id=24529116 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
phosphopentomutase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_168
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

193153..193578
-----------------
DNA (426bp)
protein (142aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKW0_MOOTA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_169
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

193575..194249
-----------------
DNA (675bp)
protein (225aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] id=24529116 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
deoxyribose-phosphate aldolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_170
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

194253..195548
-----------------
DNA (1296bp)
protein (432aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.4)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003825ACF
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_171
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(195591..197768)
-----------------
DNA (2178bp)
protein (726aa)
Multimodular transpeptidase-transglycosylase id=24529115 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
penicillin-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_172
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

197918..199177
-----------------
DNA (1260bp)
protein (420aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=24529114 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_16S_1
unknown

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199522..201074
-----------------
DNA (1553bp)
16S ribosomal RNA (16S rRNA)
ERMGT100_2_curated_scaffold_1_trna_2
unknown

Not on your lists

201329..201402
-----------------
DNA (74bp)
transferRNA Ile
ERMGT100_2_curated_scaffold_1_trna_3
unknown

Not on your lists

201445..201517
-----------------
DNA (73bp)
transferRNA Ala
ERMGT100_2_curated_scaffold_1_173
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

205652..206440
-----------------
DNA (789bp)
protein (263aa)
alias=16ft_combo_ws3_scaffold_2321_1 id=24529113 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_174
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

206458..207759
-----------------
DNA (1302bp)
protein (434aa)
id=5224535 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_175
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

207819..209555
-----------------
DNA (1737bp)
protein (579aa)
signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-] id=24529111 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
signal peptide peptidase SppA, 67K type
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_176
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

209720..211822
-----------------
DNA (2103bp)
protein (701aa)
Translation elongation factor G n=1 Tax=uncultured candidate division WS3 bacterium RepID=Q2YZV2_9BACT id=5224539 bin=16ft_combo_ws3_JS1 species=uncultured Latescibacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
fusA; translation elongation factor G
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 151-180 of 416 in total

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