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ERMGT100_2_curated_scaffold_1

Search features with annotation key words

Displaying items 181-210 of 416 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_1_177
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

211841..212596
-----------------
DNA (756bp)
protein (252aa)
Probable transcriptional regulatory protein HRM2_04000 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=Y400_DESAH id=5224540 bin=16ft_combo_ws3_JS1 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_178
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

212599..213147
-----------------
DNA (549bp)
protein (183aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP84_9BACT id=5224541 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_179
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

213163..213789
-----------------
DNA (627bp)
protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Saccharomonospora glauca K62 RepID=I1D110_9PSEU id=5224542 bin=16ft_combo_ws3_JS1 species=Saccharomonospora glauca genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ruvA; Holliday junction DNA helicase RuvA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_180
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

213825..214898
-----------------
DNA (1074bp)
protein (358aa)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP86_9BACT id=5224543 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ruvB; Holliday junction DNA helicase RuvB
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_181
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

214929..215957
-----------------
DNA (1029bp)
protein (343aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQA7_MARHT id=5224544 bin=16ft_combo_ws3_JS1 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_182
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(215958..216590)
-----------------
DNA (633bp)
protein (211aa)
alias=16ft_combo_ws3_scaffold_136_157 id=24497259 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_183
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(216814..217254)
-----------------
DNA (441bp)
protein (147aa)
prokaryotic N-terminal methylation motif domain protein id=24445589 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
prokaryotic N-terminal methylation motif domain protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
ERMGT100_2_curated_scaffold_1_184
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(217404..218834)
-----------------
DNA (1431bp)
protein (477aa)
Carboxyl transferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R8_SOLUE id=5224545 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carboxyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_185
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

219170..220570
-----------------
DNA (1401bp)
protein (467aa)
Peptidase M16-like protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A0E8_MELRP
peptidase M16-like protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_1_186
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

220567..222024
-----------------
DNA (1458bp)
protein (486aa)
putative M16B family peptidase id=12557712 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16 domain protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AHG88464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_1_187
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(222054..222563)
-----------------
DNA (510bp)
protein (170aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V5W3_9BACT
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
ERMGT100_2_curated_scaffold_1_188
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

222730..223191
-----------------
DNA (462bp)
protein (154aa)
Putative uncharacterized protein n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CWZ9_9BACT id=5224548 bin=16ft_combo_ws3_JS1 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
gatb/yqey domain protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_189
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(223118..223984)
-----------------
DNA (867bp)
protein (289aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=24526463 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
monofunctional biosynthetic peptidoglycan transglycosylase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_190
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(223987..225294)
-----------------
DNA (1308bp)
protein (436aa)
Serine phosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM31_KORVE id=5224551 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
GAF sensor-containing protein serine phosphatase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_191
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(225353..226093)
-----------------
DNA (741bp)
protein (247aa)
TonB family protein id=4895383 bin=GWC2_Ignavibacteria_56_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
TonB family protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
ERMGT100_2_curated_scaffold_1_192
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

226230..227030
-----------------
DNA (801bp)
protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRM6_9BACT id=5224552 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
enoyl-CoA hydratase/isomerase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_193
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

227072..227476
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003639570
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:AHG88517.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_1_194
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(227493..228569)
-----------------
DNA (1077bp)
protein (359aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] id=1250074 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
3-isopropylmalate dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_195
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(228588..229700)
-----------------
DNA (1113bp)
protein (371aa)
TPR repeat-containing protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM82_9BURK id=5224559 bin=16ft_combo_ws3_JS1 species=Rubrivivax benzoatilyticus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_196
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(229697..230950)
-----------------
DNA (1254bp)
protein (418aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_197
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

231079..233100
-----------------
DNA (2022bp)
protein (674aa)
hypothetical protein id=24556551 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_198
unknown

Not on your lists

comp(233097..233666)
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_199
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(233663..234886)
-----------------
DNA (1224bp)
protein (408aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=uncultured marine group II euryarchaeote EF100_57A08 RepID=A9QP30_9EURY id=5224563 bin=16ft_combo_ws3_JS1 species=uncultured marine group II euryarchaeote EF100_57A08 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_200
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

234957..235376
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=9 Tax=Bradyrhizobiaceae RepID=A5EB91_BRASB id=5224564 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_201
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(235414..235851)
-----------------
DNA (438bp)
protein (146aa)
alias=16ft_combo_ws3_scaffold_2321_33 id=24556555 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_202
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(235941..236807)
-----------------
DNA (867bp)
protein (289aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=24556556 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABX03851.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABX03851.1};; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
3-hydroxybutyryl-CoA dehydrogenase
ERMGT100_2_curated_scaffold_1_203
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236931..237791
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95527.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
ERMGT100_2_curated_scaffold_1_204
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

237805..239022
-----------------
DNA (1218bp)
protein (406aa)
Phosphonopyruvate decarboxylase-related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH05_9BACT id=5224622 bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
phosphoglycerate mutase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_1_205
unknown

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239023..240351
-----------------
DNA (1329bp)
protein (443aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_1_trna_4
unknown

Not on your lists

240477..240558
-----------------
DNA (82bp)
transferRNA Leu
Displaying items 181-210 of 416 in total

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