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ERMGT100_2_curated_scaffold_3

Search features with annotation key words

Displaying items 91-120 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_3_91
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

105297..105857
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9K2F7_9DELT id=5223869 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_92
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

105873..115121
-----------------
DNA (9249bp)
protein (3083aa)
Putative Ig domain-containing protein,putative calcium-binding protein,FG-GAP repeat protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TMQ5_9CYAN id=5223870 bin=16ft_combo_ws3_JS1 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
VCBS repeat-containing protein,YVTN family beta-propeller repeat protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_93
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

115199..116785
-----------------
DNA (1587bp)
protein (529aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=24473039 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_94
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(116782..117837)
-----------------
DNA (1056bp)
protein (352aa)
HNH endonuclease id=24415228 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
HNH endonuclease
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_3_95
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(117937..120873)
-----------------
DNA (2937bp)
protein (979aa)
Tetratricopeptide repeat domain protein (Fragment) n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W5B4_9CYAN id=5225754 bin=16ft_combo_ws3_JS1 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_96
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(120870..123035)
-----------------
DNA (2166bp)
protein (722aa)
Glycine--tRNA ligase beta subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHI2_DESK7 id=5223871 bin=16ft_combo_ws3_JS1 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glyS; glycyl-tRNA synthetase subunit beta
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_97
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(123032..124057)
-----------------
DNA (1026bp)
protein (342aa)
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=SYGA_PELTS id=5223872 bin=16ft_combo_ws3_JS1 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_98
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(124208..125974)
-----------------
DNA (1767bp)
protein (589aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUE8_9BACT
Tax=RBG_16_Zixibacteria_53_22_curated
ERMGT100_2_curated_scaffold_3_99
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(126107..126877)
-----------------
DNA (771bp)
protein (257aa)
DNA repair protein recO id=24556016 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
DNA replication and repair protein RecO
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_100
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(126922..127617)
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein id=24556015 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_101
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(127614..128096)
-----------------
DNA (483bp)
protein (161aa)
metalloprotein id=24556014 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_102
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(128112..130325)
-----------------
DNA (2214bp)
protein (738aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRD9_9BACT id=5223876 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
metal dependent phosphohydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_103
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(130358..131452)
-----------------
DNA (1095bp)
protein (365aa)
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins id=24556011 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PhoH-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_104
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(131794..132288)
-----------------
DNA (495bp)
protein (165aa)
Methylcrotonyl-CoA carboxylase alpha-subunit n=1 Tax=Aquincola tertiaricarbonis RepID=H2EPK1_9BURK id=5223880 bin=16ft_combo_ws3_JS1 species=Aquincola tertiaricarbonis genus=Aquincola taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbamoyl-phosphate synthase subunit L
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_105
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(132288..133799)
-----------------
DNA (1512bp)
protein (504aa)
Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain, ATP-binding:Carbamoyl-phosphate synthetase large n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZE2_9PROT id=5223881 bin=16ft_combo_ws3_JS1 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbamoyl-phosphate synthase L chain, ATP binding domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_106
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(133807..134583)
-----------------
DNA (777bp)
protein (259aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Probable enoyl-CoA hydratase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NX66_CHRVO id=5223882 bin=16ft_combo_ws3_JS1 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_107
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

134835..143846
-----------------
DNA (9012bp)
protein (3004aa)
Subtilisin-like serine protease n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TB44_9CYAN
subtilisin-like serine protease
Tax=RBG_16_Zixibacteria_43_9_curated
ERMGT100_2_curated_scaffold_3_108
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(143856..144713)
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDB5_MEISD
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG88032.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_3_109
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(144710..145363)
-----------------
DNA (654bp)
protein (218aa)
Lipolytic enzyme G-D-S-L family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L320_9ACTO
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:AKC81828.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
ERMGT100_2_curated_scaffold_3_110
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(145486..148134)
-----------------
DNA (2649bp)
protein (883aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_3_111
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(148142..149749)
-----------------
DNA (1608bp)
protein (536aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase n=3 Tax=Chloroflexus RepID=A9WEI4_CHLAA id=5223883 bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_3_112
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(149781..149993)
-----------------
DNA (213bp)
protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_3_113
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(150454..151791)
-----------------
DNA (1338bp)
protein (446aa)
Trypsin domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A098_9BACT
Trypsin domain protein {ECO:0000313|EMBL:EAY23941.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
ERMGT100_2_curated_scaffold_3_114
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(152097..154949)
-----------------
DNA (2853bp)
protein (951aa)
PKD domain containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF92_METPE
Cell surface protein {ECO:0000313|EMBL:KJU86253.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
PKD domain-containing protein
ERMGT100_2_curated_scaffold_3_115
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155240..155821
-----------------
DNA (582bp)
protein (194aa)
RNA-polymerase sigma-E factor n=1 Tax=uncultured bacterium RepID=K1ZP38_9BACT
Tax=RBG_16_Gammaproteobacteria_66_13_curated
ERMGT100_2_curated_scaffold_3_116
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

155814..158870
-----------------
DNA (3057bp)
protein (1019aa)
Serine/threonine protein kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI06_ANADF
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_3_117
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(158889..161897)
-----------------
DNA (3009bp)
protein (1003aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027U1_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ82716.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT100_2_curated_scaffold_3_118
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(161927..162493)
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037705A0
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_3_119
unknown

Not on your lists

162651..163577
-----------------
DNA (927bp)
protein (309aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_3_120
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164001..166424
-----------------
DNA (2424bp)
protein (808aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00003787}; EC=1.6.99.5 {ECO:0000256|SAAS:SAAS00003787, ECO:0000313|EMBL:AJE02052.1};; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
NADH-quinone oxidoreductase subunit B/C/D n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=NUBCD_GEOUR
Displaying items 91-120 of 131 in total

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