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ERMGT500_2_curated_scaffold_5

Search features with annotation key words

Displaying items 91-120 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_5_91
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98101..98499
-----------------
DNA (399bp)
protein (133aa)
ligA; Protocatechuate 4,5-dioxygenase, alpha chain (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit n=2 Tax=Rhodopseudomonas palustris RepID=B3QC69_RHOPT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_5_92
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98492..99337
-----------------
DNA (846bp)
protein (282aa)
ligB; Protocatechuate 4,5-dioxygenase, beta chain (EC:1.13.11.8)
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A3957A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_5_93
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99350..100306
-----------------
DNA (957bp)
protein (319aa)
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KG75_9GAMM
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_5_94
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100404..101096)
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZJ8_HALHL
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
ERMGT500_2_curated_scaffold_5_95
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101107..101703)
-----------------
DNA (597bp)
protein (199aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZJ7_HALHL
isoprenylcysteine carboxyl methyltransferase
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
ERMGT500_2_curated_scaffold_5_96
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101745..102710)
-----------------
DNA (966bp)
protein (322aa)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EAQ07998.1}; EC=1.1.1.169 {ECO:0000313|EMBL:EAQ07998.1};; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V1D3_9RHOB
ERMGT500_2_curated_scaffold_5_97
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102707..103672)
-----------------
DNA (966bp)
protein (322aa)
Hydrolase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I8D0_RHOVT
hydrolase
Hydrolase {ECO:0000313|EMBL:ADP69755.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
ERMGT500_2_curated_scaffold_5_trna_1
unknown

Not on your lists

comp(103790..103873)
-----------------
DNA (84bp)
transferRNA Leu
ERMGT500_2_curated_scaffold_5_98
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103918..104952
-----------------
DNA (1035bp)
protein (345aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=QUEA_AZOSB
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_99
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104949..106061
-----------------
DNA (1113bp)
protein (371aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMI3_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_100
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106119..106445
-----------------
DNA (327bp)
protein (109aa)
Putative Preprotein translocase subunit YajC n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R7F8_9RHOO
preprotein translocase subunit YajC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_5_101
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106446..108302
-----------------
DNA (1857bp)
protein (619aa)
Protein translocase subunit SecD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRY1_ACCPU
secD; preprotein translocase subunit SecD
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_102
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108355..109287
-----------------
DNA (933bp)
protein (311aa)
Protein-export membrane protein SecF n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJX7_AZOSU
protein-export membrane protein, SecD/SecF family
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_103
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109404..109862
-----------------
DNA (459bp)
protein (153aa)
cytochrome c prime id=5083518 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
class II cytochrome c
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_104
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109915..110817
-----------------
DNA (903bp)
protein (301aa)
Diheme cytochrome C-type n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P792_AZOS1
diheme cytochrome C-type
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_5_105
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110834..111700)
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WG93_CHLAA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_5_106
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111711..112928)
-----------------
DNA (1218bp)
protein (406aa)
Major facilitator superfamily permease n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZED5_9BRAD
major facilitator superfamily permease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ERMGT500_2_curated_scaffold_5_107
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112987..114354)
-----------------
DNA (1368bp)
protein (456aa)
Adenylosuccinate lyase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GJ60_NITSI
adenylosuccinate lyase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_5_108
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114368..115021
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B4B4C
uracil-DNA glycosylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
ERMGT500_2_curated_scaffold_5_109
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115152..115760
-----------------
DNA (609bp)
protein (203aa)
Glutathione S-transferase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TX45_ALIDB
glutathione s-transferase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_5_110
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115894..116313)
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000382DC13
DoxX protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_5_111
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116435..117484)
-----------------
DNA (1050bp)
protein (350aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CL24_THIA3
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_112
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117520..118731)
-----------------
DNA (1212bp)
protein (404aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) id=5048649 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
aspartate aminotransferase (EC:2.6.1.1)
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_113
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118827..119792
-----------------
DNA (966bp)
protein (322aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBH1_ANADF
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_5_114
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119794..121212)
-----------------
DNA (1419bp)
protein (473aa)
(4Fe-4S) cluster-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM33_AZOSU
(4Fe-4S) cluster-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_115
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121232..121963)
-----------------
DNA (732bp)
protein (244aa)
Putative oxidoreductase n=2 Tax=Ralstonia RepID=D8NTB1_RALSL
Fe-S oxidoreductase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMGT500_2_curated_scaffold_5_116
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122086..122850
-----------------
DNA (765bp)
protein (255aa)
IclR family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y8F7_9RHOO
IclR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_5_117
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122855..123736
-----------------
DNA (882bp)
protein (294aa)
Putative lipoprotein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJ81_MYXFH
putative lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_5_118
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123829..124821)
-----------------
DNA (993bp)
protein (331aa)
Putative methyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LET5_CHLTF
putative methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_5_119
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124837..125745)
-----------------
DNA (909bp)
protein (303aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7L2_9RHOO
D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Displaying items 91-120 of 132 in total

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