ggKbase home page

OR_07102018_0_5m_scaffold_17_11

Organism: OR_07102018_0_5m_Sphingobacteria_36_169

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 11526..12134

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003800173 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 197.0
  • Bit_score: 183
  • Evalue 1.60e-43
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 200.0
  • Bit_score: 173
  • Evalue 3.70e-41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 202.0
  • Bit_score: 386
  • Evalue 1.40e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGTTAAAAATAGAAATGAGGCTGAAATAGCCATATTAACAGCTGCTAAGACCATATTTTCAGTAAAAGGGAAAGATGGGGCTACTATGCAAGAAATAGCCAATGAAGCGGGTATCAATAAAGCATTGGTACATTATTATTTCAGAAACAAGGATTTGTTATTTGAAGAGGTTTTTTTTGATGCTGTAAAAAAATTCTCCCCCATTTTAAAACATGCAATAGCACAAGAAGTGGATTTATACAAAAAAATTCACCATATATGTGAAGCCTACATTACAATGGCCATTGAAAATCCTTTTGTGCCTGTTTTCGTATTAAGTGAAGTGAATAAGCAGCCTGAAATTTTTATTCAAAAAATGTTTCAGGGTGACCTACCAGATTTTCCAAAATTGGCTGCTCAAATTAATAAGGAAGTTAGTCTAGGAAATATAAAACCTATACAGCCTCATCATTTGATTTTAAATATGATGAGTATGTGTGTATTCCCTTTTGTATTTAAGCCAATTTTTATTGTTGGCATGCAAGCTGACAAACAATTATTTGATCAATTAATGCTTGAACGCATTAAAACGGTCCCCCAGTTCATCATTGATTCAATTAAAAAATAA
PROTEIN sequence
Length: 203
MVKNRNEAEIAILTAAKTIFSVKGKDGATMQEIANEAGINKALVHYYFRNKDLLFEEVFFDAVKKFSPILKHAIAQEVDLYKKIHHICEAYITMAIENPFVPVFVLSEVNKQPEIFIQKMFQGDLPDFPKLAAQINKEVSLGNIKPIQPHHLILNMMSMCVFPFVFKPIFIVGMQADKQLFDQLMLERIKTVPQFIIDSIKK*