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OR_07102018_0_5m_scaffold_912_13

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(12469..13383)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYA1_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 294.0
  • Bit_score: 505
  • Evalue 3.70e-140
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 294.0
  • Bit_score: 505
  • Evalue 1.00e-140
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 294.0
  • Bit_score: 505
  • Evalue 5.20e-140

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGACTACCACCCAACTTTTATCCCCCCATCACGCGCTGCGCACCGTAAGCCCGGTGATCGGCGACTCGTTGCAGCAATATTTAGCTGAAGTTCGGCGCATCCCGCTCCTCACGGTTGAAGAAGAGCAACAATTGGCCGAACAGCTCAAAAGCACGGGTGATATCAACGCAGCGCAAGCGCTCATCATGGCGCATCTGCGCTTTGTGGTGCATATTGCCCGTGGCTATCGCGGCTATGGTTTGCCGCTCTCTGATCTAATTCAAGAAGGCAACATCGGCCTAATGAAAGCAGTAAAACGCTTTGAGCCAGAGCAAAAAGTACGCCTGGTTACCTTTGCCGTACATTGGATTCGGGCAGAAATCCATGAATATATTCTGAAAAACTGGCGCATTGTGAAAATTGCCACCACCAAAGCGCAACGCAAACTCTTTTTCAAAATGCGGCAGATGAAAAATGGCTTAGGCTGGCTCACCGCCGAAGAAACCCGCGCCATTGCCGCCGAGTTAAATGTGCCTGAACGCGAAGTGGCCACCATGGAATCACGCCTTTATAGTCATGATGTGGCCATTGATGCCCCACTGTATGAAAACGATTCAGAAGGGAGTGGCCCCTCCTACGAGCAAATTCTGGTTGATCAGCATCAAGTGTCTGTTGAAGACATGACCGCCCAGCGCGATGAAGATGATCGGTTAAGCGCCATGAGCCACGCACTCACCGCTCTGGATGCGCGCAGCCGCGATATTTTAGAGCGCCGCTGGCTGGCAGAACCCAAAGCCACGCTCCAAACGCTGGCCGATGAATACCAAGTATCGGCTGAACGGGTACGCCAAATTGAAAATGCCGCCCTTAAAAAGCTCAAAATGGCATTACCCGCGCCGGAACCCTTAAATTTAAGTCAATTTAATTACCAATAA
PROTEIN sequence
Length: 305
MTTTQLLSPHHALRTVSPVIGDSLQQYLAEVRRIPLLTVEEEQQLAEQLKSTGDINAAQALIMAHLRFVVHIARGYRGYGLPLSDLIQEGNIGLMKAVKRFEPEQKVRLVTFAVHWIRAEIHEYILKNWRIVKIATTKAQRKLFFKMRQMKNGLGWLTAEETRAIAAELNVPEREVATMESRLYSHDVAIDAPLYENDSEGSGPSYEQILVDQHQVSVEDMTAQRDEDDRLSAMSHALTALDARSRDILERRWLAEPKATLQTLADEYQVSAERVRQIENAALKKLKMALPAPEPLNLSQFNYQ*