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OR_07102018_0_5m_scaffold_1781_1

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(1..669)

Top 3 Functional Annotations

Value Algorithm Source
Putative Integral outer membrane protein TolC, efflux pump component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUE8_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 224.0
  • Bit_score: 112
  • Evalue 3.90e-22
putative Integral outer membrane protein TolC, efflux pump component similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 224.0
  • Bit_score: 112
  • Evalue 1.10e-22
Multidrug resistance outer membrane protein MdtP {ECO:0000313|EMBL:KFZ90804.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 209.0
  • Bit_score: 106
  • Evalue 3.90e-20

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Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGCGCAGGCGGGTTGCATCGAATTAAACCACCCCAATGGGGGCGGGTGGCCTTTTTGGCCTTAAGCGGGTTGCTCACGGGTTGCGCGGCCTATCGCCCCTTGGTTTTGCCGCAGCAACCTGAATTTGTGGCCATAACCCCCGCGCAAAGCACGCAAACCATTCAGACGCCGCCCGTGCTTTCTTTAACGACGCTGCAAGCGCTTGTGCTGCACAATAACCCTGAACTTAAAGCGGCCAAATTCGGCGCGGTATTGGCCGCTGCCCGCACGCGCCAAGCGGGCAGCTTGCCGGATCCTACCTTAAATTTAACCCGCGATACCCCCTTAAATGGCGTGGGTTTAATTAGTGCGATGAATCAGGCCATTAGCATGGATTTATCGGCCCTTATTTCTCGTAAAGACCGCTTAAATGCCGCCAAAGCGGCGCAAATTCAGCAAGAATTGAACTACAGCTGGCTGGCATTAACGACCCAAATTAAAGCCAGCGATTTATATATTCAGCAGGTGGCCAATGGCGCGCAAATCCACGTTTTAACCGGGGAGCGTGGCGAGCTCAATGCCCGCCTACAGCAAAGTCAGGCGGCCTTGGATCGGGGGTATATCACCCAAGATCGGGTCGTGGCTGATGTGGTGCGCGCGGCAGATTTGGCGCGGCAGGTGGATGTA
PROTEIN sequence
Length: 223
MRAGGLHRIKPPQWGRVAFLALSGLLTGCAAYRPLVLPQQPEFVAITPAQSTQTIQTPPVLSLTTLQALVLHNNPELKAAKFGAVLAAARTRQAGSLPDPTLNLTRDTPLNGVGLISAMNQAISMDLSALISRKDRLNAAKAAQIQQELNYSWLALTTQIKASDLYIQQVANGAQIHVLTGERGELNARLQQSQAALDRGYITQDRVVADVVRAADLARQVDV