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RTP_09252017_14_scaffold_12223_3

Organism: RTP_09252017_14_Hydrogenophilales_65_8

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1507..2217

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus thioparus RepID=UPI000376BE13 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 236.0
  • Bit_score: 450
  • Evalue 8.40e-124
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 236.0
  • Bit_score: 445
  • Evalue 5.80e-123
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 236.0
  • Bit_score: 445
  • Evalue 2.90e-122

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCGGGTAAAGCCTCGTCGCAAGACGAACAAGTCGTCAAATATGCGCCGCTGGTCAAGCGCATTGCGTATCACATGATGGCGCGCCTGCCGGCCAGCGTCGAGGTCGACGACCTCATCCAGGTCGGATTGATCGGCCTGATGGACGCAGTCGGACGTTTCGACGGCACCCAGGGCGCGCAGTTCGAATCCTATGCCACCCAGCGCATCCGCGGTGCCATGCTCGACGAACTGCGCGAGGCCGACTGGCTGCCGCGTCACGTGCGTCAGAAATCGCGCCAGATCGAATCCGCCATCCACCGGTTGGAGCAGCGCAACGGCAAGTCGCCGTCCGAGCAGGAAATCTCGGCCGAGCTGGGCATGCCGATCGATCAGTACCAGTCCATGCTGGGCGACGTGAAATGTTCCCAGCTGCTGTATTACGAAGACTTTTCCGACGAGGACAGCGCCAGCTTTCTGGAGCGCTACCTGGTCGACGGCAGCAACGATCCGCTCTCGGTTCTGGAAGACGAAGGCTTCCGTGCCAGCCTGATCGCCGCCATCCATCATCTGCCCGAGCGCGAGCGCAGCATGATGGGCATGTACTACGAGCAGGACATGAACCTGAAGGAAATCGGCGCGGTGCTGGGCGTCTCAGAATCGCGCGTGTGCCAGCTGCATTCGCAGGCGGTGGCCCGCTTGCGCGCCCAGCTCAAGATCTGGAAAAGCTGA
PROTEIN sequence
Length: 237
MAGKASSQDEQVVKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVGRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIESAIHRLEQRNGKSPSEQEISAELGMPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLSVLEDEGFRASLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKS*