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RTP_09252017_15_scaffold_24_19

Organism: RTP_09252017_15_Sphingobacteria_36_17

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(31080..31463)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT13_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 132.0
  • Bit_score: 60
  • Evalue 1.00e-06
Ligand-binding protein SH3 {ECO:0000313|EMBL:KEQ28632.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.2
  • Coverage: 126.0
  • Bit_score: 70
  • Evalue 1.40e-09
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 132.0
  • Bit_score: 60
  • Evalue 2.80e-07

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 384
ATGAATTCCATTTGTTATCTGATGAAGTATGGGCTAAATGGTCTCTTTTTTACAGACGAACCAATGATTGATTTAAAGCAATGTGTACAAAGAAAAACCAAGTTTAATTTATCTGCTGACAAGTGCAAGCTCATCACAAAAAATGTATTACAAGGCATTGATATCAAAGCGTTGAACTATAATAAAAATCCTTTAACGGAGAATGAAGTAAAATTTATACAAGCCTGCACCAAGGACTATAGCTACGAAGAGATCGCAGCGCACTTGCAAAAAAGTGTGTATACTATTTATGGGTATAGAGACAGGATATTTAAAAAGTTAGCGGTAAAACAAAGGACCGCCATGGTGATGACAGCCCTTAAAAGAAATTATATCGATTTGTGA
PROTEIN sequence
Length: 128
MNSICYLMKYGLNGLFFTDEPMIDLKQCVQRKTKFNLSADKCKLITKNVLQGIDIKALNYNKNPLTENEVKFIQACTKDYSYEEIAAHLQKSVYTIYGYRDRIFKKLAVKQRTAMVMTALKRNYIDL*