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ERMLT700_curated_scaffold_13

Search features with annotation key words

Displaying items 91-113 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_13_91
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

99315..100754
-----------------
DNA (1440bp)
protein (480aa)
proton-translocating NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3U8_DESAC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_92
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

100790..101395
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein id=4191942 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_93
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(101459..101662)
-----------------
DNA (204bp)
protein (68aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12555628 bin=CNBR_ACIDO species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cspA; Cold shock protein, DNA binding
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_13_94
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

101942..103525
-----------------
DNA (1584bp)
protein (528aa)
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=12555627 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
IMP cyclohydrolase (EC:3.5.4.10)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_95
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103522..104373
-----------------
DNA (852bp)
protein (284aa)
membrane protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ACF29
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24836.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ERMLT700_curated_scaffold_13_96
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(104485..106362)
-----------------
DNA (1878bp)
protein (626aa)
hypothetical protein id=12556165 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_13_97
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(106383..107390)
-----------------
DNA (1008bp)
protein (336aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE id=1871886 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_98
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(107359..108555)
-----------------
DNA (1197bp)
protein (399aa)
O-antigen polymerase id=12555623 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-antigen polymerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_99
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(108552..109631)
-----------------
DNA (1080bp)
protein (360aa)
putative lipopolysaccharide heptosyltransferase III (EC:2.4.1.-); K02849 heptosyltransferase III [EC:2.4.-.-] id=12555622 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative lipopolysaccharide heptosyltransferase III (EC:2.4.1.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_100
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(109628..109801)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein; K09791 hypothetical protein id=12555621 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_101
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

109892..111307
-----------------
DNA (1416bp)
protein (472aa)
Putative TPR domain protein id=4948660 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TPR domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_102
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

111355..112158
-----------------
DNA (804bp)
protein (268aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_103
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

112208..113158
-----------------
DNA (951bp)
protein (317aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] id=12555618 bin=CNBR_ACIDO species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_13_trna_1
unknown

Not on your lists

113298..113369
-----------------
DNA (72bp)
transferRNA Gln
ERMLT700_curated_scaffold_13_104
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

113468..114448
-----------------
DNA (981bp)
protein (327aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=12555617 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_105
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


114636..115340
-----------------
DNA (705bp)
protein (235aa)
ribosomal protein L25, Ctc-form; K02897 large subunit ribosomal protein L25 id=12555616 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L25
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_106
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

115370..115954
-----------------
DNA (585bp)
protein (195aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=12555615 bin=CNBR_ACIDO species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_107
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


115997..116446
-----------------
DNA (450bp)
protein (150aa)
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 id=12555614 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsF; 30S ribosomal protein S6
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_108
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


116443..116763
-----------------
DNA (321bp)
protein (107aa)
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=12555613 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsR; 30S ribosomal protein S18
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_109
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


116790..117260
-----------------
DNA (471bp)
protein (157aa)
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=12555612 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplI; 50S ribosomal protein L9
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_13_110
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(117430..118800)
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG88649.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_13_111
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

118938..120293
-----------------
DNA (1356bp)
protein (452aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=12555611 bin=CNBR_ACIDO species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
replicative DNA helicase (EC:3.6.1.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_13_112
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

120388..121578
-----------------
DNA (1191bp)
protein (397aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] id=12555610 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alr; alanine racemase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 91-113 of 113 in total

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