ggKbase home page

GWB1_scaffold_10178_10

Organism: GWB1_OP11_39_5

near complete RP 40 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(5722..6258)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKR16535.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 349
  • Evalue 2.80e-93
RNA polymerase, sigma-24 subunit, ecf subfamily KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 169.0
  • Bit_score: 118
  • Evalue 2.10e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 116
  • Evalue 7.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OP11_ACD38-rel_39_33 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 537
ATGGAAACGGAAATTTTATACCTTGTTAGACAGTCTAAAAAAGGAAGAAAGGAGGCGTTCGGGAAACTTTATACTTTATATCTAAAAAAAGTATACAGGTTCATTTATTATATGGTATATGATACTGCTGTTGCTCAGGATTTGACCCAGGATACCTTTTTTAAGGTATGGAGGTCTATATCCGGCTTTCGGGAAGATAAGGGTACTTTTTCCGGGTATTTGTTTGCAATTGCCAGAAATGTGGTAATTGATTACAGCCGGAAGAAAAAAGAATCAAGAATTGGTCCTGAAATGGAGGATAACATTGCCTCGAGCGAAGATATTGAAGAGCAATTAGTTGCAGAAGAAAATAGGAAAGACGTACAAAATTCTTTGCAAAAATTGGATGGTGACAGCCGACAGCTGATTATCTTCCGCTATTTTGAGGAACTGTCGATATCGCAAATAGGCGAGGTTTTGGGGAAAAAAGATGGAAATGTGCGGGTTTTAATATTTCGGGCTCTTAAGAAATTAAAAAAAATTATGGGAGGAAAATAA
PROTEIN sequence
Length: 179
METEILYLVRQSKKGRKEAFGKLYTLYLKKVYRFIYYMVYDTAVAQDLTQDTFFKVWRSISGFREDKGTFSGYLFAIARNVVIDYSRKKKESRIGPEMEDNIASSEDIEEQLVAEENRKDVQNSLQKLDGDSRQLIIFRYFEELSISQIGEVLGKKDGNVRVLIFRALKKLKKIMGGK*