ggKbase home page

GWB1_scaffold_25057_6

Organism: GWB1_OD1_41_4_partial

partial RP 31 / 55 MC: 1 BSCG 36 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 2370..3299

Top 3 Functional Annotations

Value Algorithm Source
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) Tax=RIFOXYD1_FULL_OD1_41_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 309.0
  • Bit_score: 588
  • Evalue 4.70e-165
DNA-directed RNA polymerase subunit alpha, nonfunctional KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 302.0
  • Bit_score: 229
  • Evalue 1.50e-57
DNA-directed RNA polymerase subunit alpha similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 209
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_OD1_41_16_curated → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGATTTCATTACCGCAAAAAGTTAATGTCGTTTCTCATTCTGAGACCGATGCTGTTATTGAAATTGAGGGCCTTCATCCGGGTTACGGCTTGACTTTGGGTACGGCCTTGCGCAGGGTTCTACTTTCTTCTTGCGAAGGCGCGGCCGTAGTTTCTTTCCGCTTGAATAATGCGCCTCATGAGTTTTCATCCTTGCCGGGAGTCAAAGAAGATCTTGTTGAGATTTCTTTGAATCTTAAGAAACTCCGCTTCAGGGTTTTTGGTGATGAGCCACAGGTTTTGACAGTGGTCGCCAAAGGAGAACGTGAGATTAGAGCCAAGGATATAGCCAAGAACTCTTCTGTTGAGATTGTTAATCCTGAAGCCGTGATTGCCACCCTGACAGATAAAAAAGCGGTTTTTGAACTTGAGTTGATCGTGGAAAAAGGCATTGGTTATTCGACGATTGAGGAGAGAAGGAGAAAAGAAAAGCTTCCAATCGGCATGATTGAGATTGACTCCAATTTTTCGCCACTGAGCTTGGTTAATCTTGAAATAGAGAATATGCGTGTCGGCGAAAAGACTAATTACAATCGCCTGAGACTTACGATTAAAGCTGATGGTTCACTGGATCCATTGCTGGCTTTTGACCACGCGATTAATATTCTTGTTGGCCAATTTTCTGCATTAAAGGCCGAAGAAAACGAAACAGAAGAGGGCCCAACTTCTTTCTCTAGTCTGAAAGACGGATCCGAGGTTTCTTCTGTGGTTTTAGAGGAGACTTCTTTGTCGGGAAGGGTTTTGGCTGTTTTGAAGCAGCATCGGATCAAGACGGTTGGAGATCTTGGGAAAACCAGCGTTGATAAGATAAGGGCTTTCAAGGGACTCGGTGACAAAGCGGTTGAAGAGATCCAGGAAGTAGCTAAAGAATACGGTATCGTTCTGAAGTAG
PROTEIN sequence
Length: 310
MISLPQKVNVVSHSETDAVIEIEGLHPGYGLTLGTALRRVLLSSCEGAAVVSFRLNNAPHEFSSLPGVKEDLVEISLNLKKLRFRVFGDEPQVLTVVAKGEREIRAKDIAKNSSVEIVNPEAVIATLTDKKAVFELELIVEKGIGYSTIEERRRKEKLPIGMIEIDSNFSPLSLVNLEIENMRVGEKTNYNRLRLTIKADGSLDPLLAFDHAINILVGQFSALKAEENETEEGPTSFSSLKDGSEVSSVVLEETSLSGRVLAVLKQHRIKTVGDLGKTSVDKIRAFKGLGDKAVEEIQEVAKEYGIVLK*