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SCN18_14_9_16_R2_B_scaffold_108_21

Organism: SCN18_14_9_16_R2_B_Alphaproteobacteria_64_15

near complete RP 39 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(20701..21561)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=A0AZV2_BURCH similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 282.0
  • Bit_score: 392
  • Evalue 2.50e-106
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 282.0
  • Bit_score: 392
  • Evalue 7.10e-107
LysR family transcriptional regulator {ECO:0000313|EMBL:KGY54326.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 282.0
  • Bit_score: 392
  • Evalue 3.50e-106

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGGTTTACATGAGAGCCCTCGACGTGGACGCCGTTCAGGCTTTCGTTCTTGCCGCCGACTTGAGGAGCTTCACCCGTGCCGCCGAGGCGCTGGATACGACGCAGTCGGCTGTAAGTCTCAGGATAAAGCGGCTGGAGGAGGCGCTTGGTCGGAGGCTTCTCGAACGGACGCCGCGATCGGTTCGCCTGTCCGCCGAGGGAAGCCTCTTCGTCGGGCCGGCACGGGCATTGATTGCCGCTCACCAGGGCGCGCTGGGATCATTCGGGGTAGAGCAGCGACGGCTGATCGTCGGCATCAGCCATCACGTCGTCGGAGCCGAACTGCCGATCCTGATCCGCCGCGTGAACCAGGGCGATCCAGGCCTTGTGATGGAGTTGCACATCGCCTCGTCGAGCGAGGTGCTCGTCGATCTCGACGCGGGTCGGCTTGACGCCGCCATCGTGCTGCGCCACGGCCACCGGCGTCGTGGCGGCGAACTCATCCTCGAAGAGGCTTTCGGATGGATGGCCGCACCGGATTTCGATCGTGCGCCCGGTCAGCCGTTGCGGCTGGCCGCTCAGTCGGCGCCTTGCGGTGTTCGCAACATGGCGATCGACGCCCTCGATCGGGCCGGCATTCCCTGGACGGAAGTGTTCGTCGGCGGCGGCATCATCACCATCGGCGCGGCGATCTCGGCGGGGCTTGCCGTGGCAGCCTTGGGCCGCCGTGTTGCACCGACAGGCACTGTCGATGTCGGGCCCCGGCTCGACCTGCCTGTTCTGCCGGCTCAACAAGTGGTGCTCTATTCGAGCCTCACCGACCGCCGGGCCCGCGCTTCTCTCAAGACCCTCGCGGCAGCCATTCGCTCCACGGTCGATTGA
PROTEIN sequence
Length: 287
MVYMRALDVDAVQAFVLAADLRSFTRAAEALDTTQSAVSLRIKRLEEALGRRLLERTPRSVRLSAEGSLFVGPARALIAAHQGALGSFGVEQRRLIVGISHHVVGAELPILIRRVNQGDPGLVMELHIASSSEVLVDLDAGRLDAAIVLRHGHRRRGGELILEEAFGWMAAPDFDRAPGQPLRLAAQSAPCGVRNMAIDALDRAGIPWTEVFVGGGIITIGAAISAGLAVAALGRRVAPTGTVDVGPRLDLPVLPAQQVVLYSSLTDRRARASLKTLAAAIRSTVD*