ggKbase home page

SCN18_14_9_16_R2_B_scaffold_165_16

Organism: SCN18_14_9_16_R2_B_Alphaproteobacteria_64_15

near complete RP 39 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(16899..17861)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J392_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 313.0
  • Bit_score: 123
  • Evalue 2.40e-25
Multidrug resistance efflux pump-like protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 313.0
  • Bit_score: 123
  • Evalue 6.90e-26
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 319.0
  • Bit_score: 436
  • Evalue 2.40e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Xanthomonadales_63_13 → SCNpilot_P_inoc_Xanthomonadales_63_13 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GTGGTGGCCCTGTTCATCATTGCCGCACTGGTGATTTGGATTGCCCCCAGCCGCCAGACCAGCAGCGCGCAGGAAGCCCAGGCAGCGTCGGGGCCGCTGATCGCGCGGGGCAACACCGATGCTCCTGCCGGTACGGCGTCCATCGCCGGCGATACGACGGCGGGCGGCGGCGTGTTGCTCGAACTGCGCGTTGCCGACGGCCAGAAGGTGAAGCGCGACGAAGTCATCGCAGTCCTCTCGAACTATCCGATTGCCGACGTCTCGGTGCGCTCCGATGAAGCCGATCTTGAGAAGTCCAAGCGCCTGCGCCAGGCGATGATATCGGGTTATCGCGTGGCCGAGATCGCCGAGCAGGAAGTCGTGGTCAAGGCAACGGCCGAGGAGAACAAGCTCAAGGTGCTGGAGCTGCAACGGTCCGGTAAGCCACCTGATCAGAAGCAGCTCGAGCTCAACATCTCCGAACAGAAGCTGGAGCGTGAGCAGGCGAAGCTGAAGGTGATGAAGGAGACGCTGGCAACCGACCTTGCTCAGATCGACACCGATATCGGTATCAAGCAGGCCACGCTCGACAATGCGCGGACGACCCGGGAGCGGGCGTTGGTCCGTTCGCCGATCGATGGTGTGGTGGTGCAGATATGGACGCGACCGGGCGAGCGGATCAGCCAGTATGGCATCGCCAAGATTGTCGACATGAGCCAGATGCGTGTCTTTGCCGACGTCGACGAGGTGCATCTCGCTCGCATCAAGGTTGACGGCAAGGTCGAAGTCACCTTCCGCGGCAGCCCGACTGTCTACACCGGCAAGATCTCGCGCATTTCTCCCGCCGTGAAGCGAATGCAGCGCACGGAACCCGACAACGGCTCGTCGACCGACGCCCGAGTCGTGCAGGTGGAGATTACCCTCGACGATCTGTCCAGCATGCCGCAGGTGCTGGGACGCGAGACGCGCGTCACGTTCCTCTAA
PROTEIN sequence
Length: 321
VVALFIIAALVIWIAPSRQTSSAQEAQAASGPLIARGNTDAPAGTASIAGDTTAGGGVLLELRVADGQKVKRDEVIAVLSNYPIADVSVRSDEADLEKSKRLRQAMISGYRVAEIAEQEVVVKATAEENKLKVLELQRSGKPPDQKQLELNISEQKLEREQAKLKVMKETLATDLAQIDTDIGIKQATLDNARTTRERALVRSPIDGVVVQIWTRPGERISQYGIAKIVDMSQMRVFADVDEVHLARIKVDGKVEVTFRGSPTVYTGKISRISPAVKRMQRTEPDNGSSTDARVVQVEITLDDLSSMPQVLGRETRVTFL*