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SCN18_14_9_16_R2_B_scaffold_157_30

Organism: SCN18_14_9_16_R2_B_Alphaproteobacteria_64_15

near complete RP 39 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 30037..31575

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 501.0
  • Bit_score: 878
  • Evalue 2.70e-252
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 501.0
  • Bit_score: 878
  • Evalue 7.60e-253
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE64033.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 501.0
  • Bit_score: 878
  • Evalue 3.80e-252

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
GTGGGGGGAGGCTGGCAAAGAGCATTGGCGTCCGGCTTTTGCGGGAGCGGATGCGCTCACGCGCGATCCCCCGCGCGTCTCCTGATCTTGTCCGGATTGCTATTCGTCTCGCAGGTGCTCTCAGGCTGCGCGGTGGGGCCTGACTTCAAACCTCAGGCACCCCCCGAAACCTCAAAATATCTTTCCGGTCCGGCGGCAGATCGCGTGCCGGGACATCCCCTCGTGCACGGCGCGGAAATTCCTTCCCAGTGGTGGGAGTTGTTCCGCTCGCCGGCGCTGAACCGAATCGTGCAAGACGGGATCGCACACAATGCCGATCTCGCGGCGGCGGAGGCAGCAGTGAGGGTGGCGCAGGCCAACGCGCTGGCACAGCGCGGCGCCCTGTTTCCGAGCGTGACCGGAGATTTCGAATCCTCGCGTCAAAAGGTGGCGGTCGATCTGTCGTCGCCTCTTGAGTCCGGCGCCAATATTTTCAATCTGCATACCGGTCAGGTCACGGTCTCCTACGTCGCCGACGTCTGGGGAGGCACGCGCCGTCTTGTTGAGTCCGCAGACGCGCAAGCCGAGATGCGCGCGTTCCAGCGTGAAGGCGTCTATCTGACGCTGGCCAGTAACATCGCGCTTGCTGCGATCGAGGAAGGGCGGTTGCGCGGACAGATCGCGGCGACCCGCCGGGTCATGGGCCTGCAGTCCGAGGTTCTCAAACTCTTGAAGCGGCAACAGGAGCAGGGCCAGATCGCCCTGACCGACGTTGCGGCGCAGGAAACTGCGGTTTCGCAGACCAGGCTCTTGTTGCCGCCGCTCGAAAGGCAGCTCGCGCAACAGCGTCATTTGTTGACGTTTTTGACCGGACGCCTGTCGAGCGACGCACCGGCCGAAACTTTCAATCTTGGCTCGTTTCGAATGCCGCGCCGTCTTCCTCTCAGCTTGCCGGCTGATCTCGTAAGACAGCGCCCCGACATTCGCGCCGCCGAGGCCAATCTCCGCTCCAGCAACGCAATGATCGGAGTGGCGATCGCCAACCGCTTGCCGCAGATCTCCCTGACCGGCAATGTCGGCGCGGCGGCTGCCCGATTTGCAGAACTGGCCACACCGGGAGCGGGCCTCTGGATGCTGGCCGGGAATGCGGCGCAAACCATTTTCGATGCGGGAACGCTGGAAAACAAGCAGGTCGCCGCGGAACAGGAAACCAATCAGGCTCTCGCTCAGTATCGCAGCACGGTGCTTGCTGCGTTTCAAAACGTCGCGGACGTCTTGCGGGCTCTTCAGGCCGGTACCCGCGCCATCAGTGCCGCGACAGATGCGGAGCGATCCGCATCGGAGAGCATCGCGTTGTTGCGCAAGCAGGTGGATCAGGGACAGATCAGCGTGCCGCTTCTGCTCGCCGCGCAACAGGCCTATCTGCAGACCTCTCTTGCGCGCCTCGATGCGCAGGCTTCTCAACTCGCCAATACGGTCGCGCTGTTTCAGGCTCTCGGCGGCGGCTGGTGGAATAGGGAATCCGGATTCGCTCGTGTTACCGAGGCAAAGCCGCTCTGA
PROTEIN sequence
Length: 513
VGGGWQRALASGFCGSGCAHARSPARLLILSGLLFVSQVLSGCAVGPDFKPQAPPETSKYLSGPAADRVPGHPLVHGAEIPSQWWELFRSPALNRIVQDGIAHNADLAAAEAAVRVAQANALAQRGALFPSVTGDFESSRQKVAVDLSSPLESGANIFNLHTGQVTVSYVADVWGGTRRLVESADAQAEMRAFQREGVYLTLASNIALAAIEEGRLRGQIAATRRVMGLQSEVLKLLKRQQEQGQIALTDVAAQETAVSQTRLLLPPLERQLAQQRHLLTFLTGRLSSDAPAETFNLGSFRMPRRLPLSLPADLVRQRPDIRAAEANLRSSNAMIGVAIANRLPQISLTGNVGAAAARFAELATPGAGLWMLAGNAAQTIFDAGTLENKQVAAEQETNQALAQYRSTVLAAFQNVADVLRALQAGTRAISAATDAERSASESIALLRKQVDQGQISVPLLLAAQQAYLQTSLARLDAQASQLANTVALFQALGGGWWNRESGFARVTEAKPL*