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SCN18_25_8_15_R4_B_scaffold_71_219

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 211929..215690

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 1290.0
  • Bit_score: 1059
  • Evalue 0.0
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 1188.0
  • Bit_score: 691
  • Evalue 4.20e-196
Exodeoxyribonuclease V subunit gamma n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 1272.0
  • Bit_score: 1058
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3762
GTGCACAACGTCGAAACGTCAACGGGCCTGATCCTGCTGCGTGCGAGCCGCCTGGAGGCGTTGCTCGAGCCGCTGGAAGCCTTGCTGGCACAGACGCGCCCGGCGCACCCGCTGGCCCCGCAGGTGGTGATCGCCGCGCATCCGGGCATGCAGCAGTGGCTGTCCGGCGCGCTGGCGCGCAAGCGCGGCGCAGGGCGAATCGTCGCCAATCTCGACGTGCAGCTGCCCAGCAGCTGGCTGGACGGGCTGTCGACGCAGCTGCTCGGTGAGCGCGCGGTGGCGCTGCCGCACTACCGCCGCGGGCACCTGCGCTGGACCCTGCACGCGCTGCTGGGCGCGCCTGCACGGCACGGCGTCTGCGATCCGCGCGTGCGCGACTACCTCGCGGGCGCGGCCAGCGCCGATGAGCGCGCATTGCGCCGCTTCCAGCTGGCCGACCGGCTGGCGCGGGTGTACTCGCAATACCTGGTGTACCGCGGTGACTGGCTGCTGGCCTGGGAAGCGGGCAAGCACGTCTTCGCCACCGCGCAGCGCCCCGATCCTGCGCTGCGTGCGCTGGAAGCCGAATGCCTGGCGCCGCTGTGGCAGGCCGTGGCCGGCGCGCTGGGCGAGCACCGCGCGCGCCTGGTGCAGGCGCTCGTCGCCGGGCTGCAGGCAGAGGCCGGCCAGCGCGCGCCGCTGCATGTGTTCGGGCTGTCGCACCTGCCGCCGGCGGAATTGTCGGTGCTGCGGGCGTATGCGCGCCGCGCGCCGGTGTTCCTGTACGCGCCCGATCCCTGCCGCGAATACTGGGGCGGCCTGCAGCGGGCCACTGGGCAGGGCGACTGGCGCAAGCCCGATGTATCCGGTTGGCAAGCCTTCCGCGATGACGAACAGGCGCGCTTCGACGATCCCGATGCGCTCGACTGGCGCGAGCAAGGCCACCCGCTGCTGGCGCGCTGGGGACGCCTGGGCCAGCACCTCTTTGCCGCACTGGTGGACGATGAGCTGCGCGAGGATATCCGCCACTGGCGCGATGCCGGTGATGCCGCGCCGGGCAACCGTCTCGAGCGGCTGCAGGAAAGCATCCGCCGGCTGCAGCCCGAGTTGATGCGGGAGGACGCGGCCGATCCGGCGGCTGCCGCCGATGCCAGCCTGCGCGTGCACGCCTGCCACACCCGCCTGCGCGAGCTGGAGGTGCTGCGCGATGCGCTGCTGGATGCGGTTGGCAAGGAGGGCATGCGTCCCGGCGACATCGCGGTGATGGCGCCCGACATCCAGGCCTATTTGCCGCTGATCCCGGCGGTGTTCGGCGAGCCCGGCTCTGCGCGCGAGCGCCTGTTGCCCTACCACCTCGCCGACGTGCCCGTCGCCCGCAGCCATCGGCTGTTCGCCGTGTTCGCCACCCTGCTCGGGCTGGGCGCATCGCGCATCACCGCGCCCGAGGTGGTGGACCTGCTGGGCGTGGTGGAAGTGCGGGCGGCCCTGGGGCTGGATGCGGGGGATGCCGAAATCCTGGTGGAATGGTTGCGCAACAGCCGCGTGGCCTGGGCGCTGGACGCTGCGCACAAGCAGGCGCTGGCGCTGCCGGCGCGCGCCGAGCACAGCTTCGCCTGGGCGATGGACCGGCTGCTGGCCGGCTACCTGATGGCCGACGTGCCGGGCGGGATCGATCCGCCGCCGGTCACGCTGCCCGATGGCACCGCATTGCTGCCGTTGGCCGGCATCGAAGGCCCGTCCGCCGCGGCGCTGGGCAGCCTGGACCGCCTGCTGTGCGAGCTGCAGGCATGGCGCGACCTGGCCCAGATCGAGCAGCCTGCAAGCCAGTGGGCGACGGTGCTGCGTGAGCGCGTGGATGCGCTGCTGCGCATCGACCGCAGCGATGCCGACGCCCGCGCCGCGCTGTCGGTGGTGCATCGCGCGATCGCCCAGCTCGCGGCGGAACCGGCGCGCAACGGCGAGGACCCGATGCTGCGGCTGACGGTGGTGCGCGAACTGCTGCAGGACGCACTGGCCGCCGCGCCGGAGCGCCAGCGCTTTCTGCTGGGCGGCATCACTTTCTGCGGCATGGTCCCGCAGCGTGCGATCCCGTTCGCCATAGTCTGCGTGCTGGGGCTGGACGAAGGCGCGTTTCCGCGCCAGCCATCCGATGGCGGCATCGACCTGATGGCGCGCCTGCGCCGCCTCGGTGACCGCGACGTGCCCGGCGATGACCGCTACCTGTTCCTGGAAACCGTGATGTCCGCGCGCAAGCGGCTGCACCTGTCGTACATCGGCCAGGGCGTACGCGACGGCAAGCACCGCAACCCGGCCGCGCCGCTGGCCGAACTGCTGGCCGAACTCGACCGAACCTGCGGCAACGCGCCCGACGACGAAAAGGCGCCACGGCCCTGGCTGGCGCGCCACCCGCTGCAACCGTTTGACGCGCGTTATTTCGATGGCAGCCATCCGGCGCTGTTTTCCTATTCCTCGGCGTTCGCGGGCATGCGCGGCGCGGGCAGGGGGAGGCTGCCGCGCCTGCGCGACGGCGATCTCCCCGCGCCGGAATCACTGCCAGAGCCGCTGCCGTTGGCCATGCTGGAGGGTTTCTTCAAGGACCCTGCCAAGGCGCTGTTGAAGGAGCATCTGCAGCTGTCGCTGGATGCGCTGGACGACGACGTGCGGCTGGCGGAAGACGAGCCGATGGACGCGATTCCGCGGATCCACTCGGTGGCGCGCACGGTGTTCCTGCAGCAGGTGCTGCCGCGCAAATGCGGCGATCCTGTGTGGGAATGGGACCGCCAGCCGCCGGCGTGGGTGGGCCTGGGCGGGCTGCTGCCGCTGGGCGCGGCCGGCGATGCGGCCTGGGCGAAGGAGGCTGCCGCGGTGGACGCCCTGTGGAGCCAGGCCGACGCCTGCGGCCGTTTCGATGCGCGCGGCCAGCGCGGTGGACAGGCGGTGCGGGTGGACGTGCCTTTGCGGCTGCCCGGCGACGATGGTGCCGGCGACGATGGGCCGCAGCGCGTGGCCGGGTTGCTGCGCAATGTGTTCCCGCTTGCGGGATCGGCGGACGGGCTGCAGGTGGTGTTTGCGTACCCCGATCCGAAGAATGAAAAAAAACACCTCAAGGCCCCGAAGAACCTGAACTTCAAGGAGCGCGTTCCCGCCTTCCTGCACTGGGCATTGCTGCGCCTGCACGCCGCGGCCGGCGACACGCCGATACCGGTTCGGCTGACCATGCTGGCAGACGGGGAACCGGATCTGGCCGCGCAGGTGAATGCCTGGGACTTGCGCTACTGCGCCGCCGGCGCGGCAGAGCGTGCCGCCCTGGATGCCGACCTGCGGCGCCGTCTGCGCGCCCTGGTCGAATTGCTGCGCAACGGCCACCGAGGGCTTTCCTGGTTCCATCCGAAGTCCGGATGGGCCGCCTTGCAGGCGCTGCAAGCCGCGCCGAAAAAAGCCAAGGGCGAACAGGGTGAGGCCGGGATGGGGAAAGAAGCCGGCGGCGCCGCCGAAGCTTTCGCGGGGGCGGACGTGGCGGCGCAGCGGTCGCGTGAGGCCGCGATCGCCAAGGCGGTGCGCGGCGAGTGGGTGAGCGAGCCAGGCCAAAGCGTCGGCGAGCGCGATTACGCCCCCGGCTATGCGCAGCTACTGGAAGGCGACCTGGTCTTCGGCGATCCCGATACCGACCCGGATGGCCGCGCCCTGCGCGCGCTGCTGCAGGACGCGCAGGCTATCCACACCCTGATCATGCTGGGCGACAGCGACACCCCTCCTGCCGCCGCCAGCGAGGAAGCCGCATGA
PROTEIN sequence
Length: 1254
VHNVETSTGLILLRASRLEALLEPLEALLAQTRPAHPLAPQVVIAAHPGMQQWLSGALARKRGAGRIVANLDVQLPSSWLDGLSTQLLGERAVALPHYRRGHLRWTLHALLGAPARHGVCDPRVRDYLAGAASADERALRRFQLADRLARVYSQYLVYRGDWLLAWEAGKHVFATAQRPDPALRALEAECLAPLWQAVAGALGEHRARLVQALVAGLQAEAGQRAPLHVFGLSHLPPAELSVLRAYARRAPVFLYAPDPCREYWGGLQRATGQGDWRKPDVSGWQAFRDDEQARFDDPDALDWREQGHPLLARWGRLGQHLFAALVDDELREDIRHWRDAGDAAPGNRLERLQESIRRLQPELMREDAADPAAAADASLRVHACHTRLRELEVLRDALLDAVGKEGMRPGDIAVMAPDIQAYLPLIPAVFGEPGSARERLLPYHLADVPVARSHRLFAVFATLLGLGASRITAPEVVDLLGVVEVRAALGLDAGDAEILVEWLRNSRVAWALDAAHKQALALPARAEHSFAWAMDRLLAGYLMADVPGGIDPPPVTLPDGTALLPLAGIEGPSAAALGSLDRLLCELQAWRDLAQIEQPASQWATVLRERVDALLRIDRSDADARAALSVVHRAIAQLAAEPARNGEDPMLRLTVVRELLQDALAAAPERQRFLLGGITFCGMVPQRAIPFAIVCVLGLDEGAFPRQPSDGGIDLMARLRRLGDRDVPGDDRYLFLETVMSARKRLHLSYIGQGVRDGKHRNPAAPLAELLAELDRTCGNAPDDEKAPRPWLARHPLQPFDARYFDGSHPALFSYSSAFAGMRGAGRGRLPRLRDGDLPAPESLPEPLPLAMLEGFFKDPAKALLKEHLQLSLDALDDDVRLAEDEPMDAIPRIHSVARTVFLQQVLPRKCGDPVWEWDRQPPAWVGLGGLLPLGAAGDAAWAKEAAAVDALWSQADACGRFDARGQRGGQAVRVDVPLRLPGDDGAGDDGPQRVAGLLRNVFPLAGSADGLQVVFAYPDPKNEKKHLKAPKNLNFKERVPAFLHWALLRLHAAAGDTPIPVRLTMLADGEPDLAAQVNAWDLRYCAAGAAERAALDADLRRRLRALVELLRNGHRGLSWFHPKSGWAALQALQAAPKKAKGEQGEAGMGKEAGGAAEAFAGADVAAQRSREAAIAKAVRGEWVSEPGQSVGERDYAPGYAQLLEGDLVFGDPDTDPDGRALRALLQDAQAIHTLIMLGDSDTPPAAASEEAA*