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SCN18_25_8_15_R4_B_scaffold_71_220

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 215687..219346

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 1264.0
  • Bit_score: 1005
  • Evalue 3.70e-290
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 1243.0
  • Bit_score: 945
  • Evalue 4.30e-272
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 924.0
  • Bit_score: 527
  • Evalue 6.00e-147

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Taxonomy

Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3660
ATGAGCCCGCCCATGGACTGGACCACCTTGCCCTTGCAGGACGGCGGCCGCAGCCTGGTGGAGGCCAGCGCCGGCACCGGCAAGACCTGGACCATCGCCGCGCTCTACCTGCGCCTGCTGCTGGAGCGGCAGCTTTCGCCGCGCCAGATCGTCGTCAGCACCTTCACCAACGCCGCCGCCGCCGAGCTGCGCGAGCGCCTGCGCGGCAAGCTGCTGTGGGCGCTGGCCGAGGCCGCCAAGCACCGCGACGGCATCGCCAGCGACGAGGGCAGGCAGTCGGACTGCGGCTGGATCCGCCGGCGCTGGCGCGCCCAGCCGGCCGCGCTCGGGAAGGACGTGCAGCGCCTGCAGGCCGCACTGGCCGAGTTCGATGCCGCGCCGATTTCCACCCTGCACGCGCTGTGTTCGCGCATCCTGGCCGACCATCCGTTCGCTGCTGGCGCGCTGTTCCGCGGTCGCGAGATGGTCGATGGCAAGACGCTGGAAGCCGCGCTGGTTGCCGATCTGTGGCGGGTGATCGCCCAAGGCGGGGAGTCGGATGAGCTGGTGGCGCTGGCACGCGCGGCCGGCATCACCATCAGCACGTTGAAGAAATACGCGCCGGTGTTGCTGCAGGCGGATGTCGAACTGGAGCCGCTGCCGGCCGAGGAGGTGCGCATGGCAGTGGCGCGCGTCCTCGGCGATGTGCCTGTCTGGCGGGCAGAGGTGCAGGCGGTGCTGGCTACGCCCAAGTTGCTGCGCGCCGGCGGCGGGTTGGAGAAAGCCTGGCGGGCGCTGGCGGGCGCACTTGCCGGCGATGGCGGTGATCTGGGGGATGTGCTGCTAGCGCATCAGAAGGCGCTGACGGAGGCCGGTGAATCCAAGGGCGTGAACAAGGCGGGGATGGACGATCCGCGCGTGCAGCGGCTGGTCGCCAGTTCGGTCGCGCTCGCCGGCGTGCTCTCGCCGATCCAGCTCGATCGCGCCAGCCATGTTCCCCTGCGCCGCTTCCTCGCCGCCGCCCAGCGCTGGTGCTGCGCCGCCCTGCAGGCACGCCTGGACGCCGCCAACCAGTCCAGCTTCGACCAGCTGCTGGTCACGGTGCGCGACGCGCTGGCCCCCCGCGATGGGCAGCGGACGCTGGCGGATGCGCTGTTTGCCGCCTGGCCGGTGGCGCTGGTGGACGAGTTCCAGGACACCGACCCGGTGCAGTTCGGCATCCTCGATGCGATCTATAGCGCTGCCGATGGCGCGCCGCGCGGGCGGCTGGTGATGATCGGCGATCCCAAGCAGGCGATCTACCGCTTCCGCGGCGGCGACGTTGCGACCTATCAGCGGGCCAAGCAGGCCGTCCCCGTCGAAGACCGGCTCACGCTGGAGACCAACCATCGCTCCAGCCGGCGCTATGTCGAGGCGGTCAACCAGTTCTACGCGAACACGCGCGCCGAGCTGGGGCCGAAGCAGGCGACGACCACCATCCGCTATCAGCGCGTTGAGCCGAGCAGCCGCCGCAACGCCCAGCCGCTGTGCGCCGGGCGCGACAGCAAACCCGTCAGCCGCCCGCTGGTGCTGCACCGGCTTGCGGCAGACGACGACAGTCACGATCTCGAAGCGCACGCGCTGCAGGTATGCGCGGGGCAGATCGCGTGGGCGCTGTCGGAAGACGGCTACCGCATTGGCGAAGGCCGGCTCCGGCCCGGCGACATCGCCGTGCTGCTGCCCAGCAATGCGCAGCTTGCGAAACTGGCGGTGATGCTCAAGGCGCGCGGCGTGCCCTGCGTGACCGGTTCGCAGAAGAGCGTGTTCGAGACTGCCACCGCCCGCGAGTTGCGGCTGATCCTGCATGCGGTGCTGCATCCTGAAGATCCGCGCACGCTGCGAGCTGCGCTGGCCACGCGCCTGTGCGGCGCAAGCCTGGGCGCCTTGCAGGCGTTGCGCCACGACGGGGCGGACTGGGACAGTCACGCCAACCGCTTCCATGCCCTGCGCGCCATCCTGGAGCGCGGCGGTCCGCTGGCGCTGGTGGTGGCTTTGTTGGAGCAGCATGCCGCACGCCTGCTGGACGCGGTGGAAGGCGAGCGCATCCTCACCGACCTGCGCCATCTCGGCGAGCTGTTGCAGGAGGCCTGGGACGAAGGCGGCGGTGGCGAGCAGCTGCTGGCATGGTTCGCCGACCAGATGGCTGATGGTGGCGAAGGCAGCGATGCCGCCGATACGCGCGCGTTGCGGCTGGAGTCGGATGCCGCGCGCGTCAAGCTGATGACCCTGCACGCCAGCAAGGGGCTGGAGTTCGGCGTGGTGTTCCTGCCGCTGATGTGGAAGCACGCGCGATCGAAGCTCGCCGAACGCAGCCCGCACTTCCTCGCGGGCCCGGATGGCAGCGGCAAGTACCTCGTCGAAGGTCCGGCCAAGGACATCGTCAAACAGCAGGAGCTCGAGGAGCGCCATCGCATCCTGTACGTGGCGCTGACCCGCGCCATCCATGCCTGCCACGTGTTCGTACTGCCAACGGGCGATGGAGCCGCCGATGCCATTCGCCGCGCGAGCGCAAAGGATGTGCCATTGAACGACCTTGAACTGTCCGTGTTCCCGGCCGACGGGGCGGACTGCATCTGCGTCATCGACGGCTGGAATCCGCATCGCGGCCTCGCCTGGCGGGGCGGCGGGGAGGCGGCGGGTGCGCGCAGCGCCCGCCCCTTGCCCGCGGCGGCGCCTGGGCCGTTGCCGATGCGGCACAGCTTCACCACGCTCAGTGGCGGCGGTGGGCATCGCCTGGGGCTGGAGGACGGCGCGGCGGAGGATGAAGCGCAGGCGGATGAAGCCGCCGCCGCGGGAGGTGGCCCCGATAGCGCGAGCAACAGCGCGGAGGCTGCGCCGAATGTCGCACCGACTGTCGTCGAAGCCGTCCGCCATGCCGAACTCGATGCACTGGCGGGCGTCGCCGGCGCCGACTTCGGCAATGCCGTGCACGCGCTGTTCGAGCATCGCGTCCCCGGCCAGCCGATCTCCCAGGAAGCCGTGCTCGCCGCCCTGCGCGCGCATGGCGTGCGTCCGCGCGAAGGCACGCTGGAGGCGTTGGTGGCGCCGTTGGCGCGGCGCCTGCAGGCGGTGCTGGAGACGCCACTGGCAGGGGAGGGCGGCCCGCGCCTGTGCGACCTTGCGACTGCCGACATGCGGGCGGAGCTCGAGTTCAACTACCTGCTCGATGGCGCCTCGCTGCGCGCCTTGCGCAAGGCCTGCGAGGCCCATGGCGAGCCGGGCCTGGTGCCGCTCCGCGACCAGACGCTGGCCGGCCTGATGAACGGCAAGATCGACCTCGTGTTCGCCCACGGTGGCCGTTTCCACGTGCTGGACTACAAGGGCAACCAGCTCGCCGCGGGACCGCAAGGAGGCCTGCAGGACTACGCCCCTGCGGCACTCGAGGCGACGATGCTGGCCACCGGCTACCGCCTGCAGGCGCTGCTTTATACGGTTGCGCTCGAGCGCTATCTGCGCGAGCGCCTGGGCGCCGTGTACCGACGCCACCAGCATCTCGGCGACTGCTGGTACCTGTTCATCCGCGCGGTCGGCCTGCGGCTACCGGACGGGACTCCCTGCGGCGTCTGGCATCACCGGTTTACCGACGATCTGCTGGATGCCGTGCAGGGTGTGCTGGGGCTGGATCTGGAGGAGGCTGCATGA
PROTEIN sequence
Length: 1220
MSPPMDWTTLPLQDGGRSLVEASAGTGKTWTIAALYLRLLLERQLSPRQIVVSTFTNAAAAELRERLRGKLLWALAEAAKHRDGIASDEGRQSDCGWIRRRWRAQPAALGKDVQRLQAALAEFDAAPISTLHALCSRILADHPFAAGALFRGREMVDGKTLEAALVADLWRVIAQGGESDELVALARAAGITISTLKKYAPVLLQADVELEPLPAEEVRMAVARVLGDVPVWRAEVQAVLATPKLLRAGGGLEKAWRALAGALAGDGGDLGDVLLAHQKALTEAGESKGVNKAGMDDPRVQRLVASSVALAGVLSPIQLDRASHVPLRRFLAAAQRWCCAALQARLDAANQSSFDQLLVTVRDALAPRDGQRTLADALFAAWPVALVDEFQDTDPVQFGILDAIYSAADGAPRGRLVMIGDPKQAIYRFRGGDVATYQRAKQAVPVEDRLTLETNHRSSRRYVEAVNQFYANTRAELGPKQATTTIRYQRVEPSSRRNAQPLCAGRDSKPVSRPLVLHRLAADDDSHDLEAHALQVCAGQIAWALSEDGYRIGEGRLRPGDIAVLLPSNAQLAKLAVMLKARGVPCVTGSQKSVFETATARELRLILHAVLHPEDPRTLRAALATRLCGASLGALQALRHDGADWDSHANRFHALRAILERGGPLALVVALLEQHAARLLDAVEGERILTDLRHLGELLQEAWDEGGGGEQLLAWFADQMADGGEGSDAADTRALRLESDAARVKLMTLHASKGLEFGVVFLPLMWKHARSKLAERSPHFLAGPDGSGKYLVEGPAKDIVKQQELEERHRILYVALTRAIHACHVFVLPTGDGAADAIRRASAKDVPLNDLELSVFPADGADCICVIDGWNPHRGLAWRGGGEAAGARSARPLPAAAPGPLPMRHSFTTLSGGGGHRLGLEDGAAEDEAQADEAAAAGGGPDSASNSAEAAPNVAPTVVEAVRHAELDALAGVAGADFGNAVHALFEHRVPGQPISQEAVLAALRAHGVRPREGTLEALVAPLARRLQAVLETPLAGEGGPRLCDLATADMRAELEFNYLLDGASLRALRKACEAHGEPGLVPLRDQTLAGLMNGKIDLVFAHGGRFHVLDYKGNQLAAGPQGGLQDYAPAALEATMLATGYRLQALLYTVALERYLRERLGAVYRRHQHLGDCWYLFIRAVGLRLPDGTPCGVWHHRFTDDLLDAVQGVLGLDLEEAA*