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SCN18_25_8_15_R4_B_scaffold_71_247

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(244519..248019)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TP00_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 1159.0
  • Bit_score: 1765
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 1158.0
  • Bit_score: 1764
  • Evalue 0.0
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 1167.0
  • Bit_score: 1801
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
ATGACGTCCCGCATGGCCGATTCCCCCCTGTCCATTCCGGTTCCCCTGCCCCGCCCCGGCCAGCTGCGCGCCTGGTGGCGCGCGCCGGCCAGCGGCACCGCGCTGGCGTTGGCCGCGCTGGCCGCCGCCCACCGGCACCCGGGCCCGCTGCTGCTGGTGGCGCGTGACAATCACACCGCGCACCAGCTGGAAGCCGACCTGCGCACCCTGACCGGCGGCGACCTGGCGCTGCCGGTGCTGGGCTTCCCGGACTGGGAAACCCTGCCCTACGACCGCTTCAGCCCGCATCCGGACATCACCAGCCAGCGCCTGGCCACGCTGGCGCGCCTGCCCACGCTGACGCGCGGAATGGTCGTGGTGCCGGCCGCGACCCTGATGCAGCGGCTGGCCCCGCGCAGCCACGTGCTGGGCGGGCGCTTCGACGTGCGCGTGGGCCAGCGCCTGGACCTGGGCGCCGAGCAGCGCCGGCTGGAAGCGGCCGGCTACCGCCACGTGCCGCAGGTGTTCGATCCCGGCGATTTCGCGGTGCGCGGCGGCCTGCTGGACGTGTACCCGATGGGTGCCGAGGCGCCGTTCCGGATCGAACTGCTGGACGACGAGATCGACAGCATCCGCACCTTCGACCCCGACAGCCAGCGCTCGCTGGACCGCTGCGAGGCGATCACGCTGCTGCCCGGACGCGAGGTGCCGATGGACGAGGCCCACGTGCAGCGCGCGCTGGAGGCCCTGCGCGAGCAGTTCGACATCGACACCCGGCGCAGCGCGCTGGTGCAGGACCTGAAGGCCGGGCTGACCCCGGCCGGCGTCGAATACTACCTGCCGCTGTTCTTCGCCCCGCAGCGCGACACCGGTCTCAGCACCGAGACCCTGTTCGACTACCTGCCGGCGGACGCGCTGCCGCTGCTGTGCGAGGGCGCGCTGGAAGCGGCCGAACAGACGTGGGCGCAGATCGGCCAGCGCCACGAGCAGCTGCGCCACGACCTGGAACGCCCGCTGCTGCCGCCCGAGGCACTGTGGCAGCCGCCGGAGGCGCTGCGCGAGCGCCTGAACCGCAGCGTGCGCATCGAAGTCTGCGGCGCCGCGCATCCGCGCCACGGCGAGGCCCACGTGCTGCCGCTGCAGCCCGCGCCGAGCCTGCCGCTGGCCACGCGCGACCACGCCCCGGGCGAGGCGCTGCGCGCGTTCCTGGCGCAGTCCCCTGGGCGGGTGCTGATCGCGGCGGATTCGCCCGGCCGCCGCGAGGCGCTGCTGGACGTGCTGCAGGCGGCCACGCTCGCGCCGAAGGTGGTGGAAGGCTGGCCGGCGTTCGCCGCCGGCGATGCCCGCTTCGCGATCGCGGTGGCCGCGCTCGACGACGGCTTCGCCCTGGATGCACCGCCACTCTGCATTCTCACCGAACGCCAGCTGTTCCCCGAGCGCGCCAGCCAACCGCGCCGGCGCAAGCGCGCGGGGCGCGAGCCGGAGGCGATCATCCGCGATCTGGGCGAGCTGACCGCGGGCGCGCCGATCGTGCACGAGGACCACGGCGTCGGCCGCTACCGCGGGCTGGTGGCGATGGACGTGGGCGGCCTGCCCGGCGAGTTCCTCGAAATCGAATACGCCAAGGGCGACCGCCTGTACGTGCCGGTGGCGCAGTTGGACCGCATCAGCCGCTACTCCGGCGCCAACCCGGACACCGCGCCGCTGCACAACCTCGGCGGCGAGCAGTGGGCGAAGGCGAAGAAGAAGGCGGCCGAGAAGGTGCGCGACGTGGCCGCTGAGCTGCTGGAGATCCAGGCCAAGCGGCACGCGCGCCAGGGCCTGGCGATCGACGTGGACCGCGCGCTGTACGAACCCTTCGCGGCCAGCTTCCCGTTCGAGGAAACCCCCGACCAGCACGCGGCGATCGAGGCGGTGCTGCGCGACCTGCAATCCAGCCTGCCGATGGACCGCGTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTGGCGGTGCGCGCCGCGTTCGCCGCCGCCAGCAGCGGCAAGCAGGTGGCGGTGCTGGTGCCCACCACCCTGCTGGCCGAGCAGCACTACCGCAACTTCCGCGACCGCTTCGCCGACTGGCCGCTGCGGGTGGAGGTGCTGTCGCGCTTCAAGTCGAAAAAGGAGATCGAAGCGGAATTGCAGAAGCTCGCCGAGGGCAAACTCGACGTGATCGTGGGCACCCACCGCCTGCTGCAGCCGGACGTCAAGTTCGCGGACCTGGGCCTGGTGATCGTGGACGAGGAGCAGCGCTTCGGCGTGCGCCAGAAGGAGGCGCTGAAGAAGCTGCGCGCCAACGTGCACCTGCTCACGCTGACCGCCACGCCGATCCCGCGCACGCTGAACATGGCGATGAGCGGGCTGCGCGACCTGTCGATCATCGCCACCCCGCCGGCCAACCGGCTGGCGGTGCAGACCTTCGTCCACGCCTGGGACGAGGCGCTGCTGCGCGAGGCGTTCGCGCGCGAGCTGGGCCGCGGCGGCCAGGTGTACTTCCTGCACAACGACGTGGAGAGCATCGGGCGCATGCACGACCAGTTGCAGGCGCTGGTGCCGGAGGCGCGGATCGGCGTCGCCCACGGCCAGATGCCGGAGCGCGAGCTGGAACGGGTGATGCTGGATTTCCACAAGCAGCGCTTCAACGTGCTGCTGTGCACCACCATCATCGAATCCGGCATCGACATCCCCAACGCCAACACCATCATCATCCACCGCGCCGACAAGTTCGGCCTGGCCCAGCTGCACCAGCTGCGCGGGCGCGTCGGCCGCAGCCACCACCGCGCCTACGCCTACCTGCTGATCCCCGACCGCCGCAGCATCACCGAGGACGCGCGCAAGCGGCTGGACGCGATCAGCGCGATGGACGAACTCGGCGCCGGCTTCACCCTGGCCACCCACGATCTGGAAATCCGCGGCGCGGGCGAACTGCTGGGCGAGGGCCAGAGCGGGCAGATGGCCGAGGTCGGCTTCAGCCTGTACACCGAGCTGCTGGAGCGCGCGGTGCGCAGCATCAAGCAGGGCAAGCTGCCAGACGTGGACGACGTGGATCGCCACGGTGCCGAGGTCGATCTGCACATCCCCGCCCTGATCCCGGACGACTACCTGCCCGACCCGCACACCCGCCTGACCCTGTACAAGCGCATCAGCGCCGCCCGCGACGAAGCCGCCCTGCGCGAGCTGCAGGTGGAGATGATCGACCGCTTCGGCCTGCTGCCCGACCCCGCCAGGCACCTGTTCGCGGTGGCCGAGCTGAAGCTGGCTGCGACCCGGCTTGGCATTCGCAAACTCGACCTCGGCGCCGGCGGCGGCCGCCTGCAGTTCGTGGAGAAGCCCAACGTCGACCCGATGGCGGTGATCCGCCTGATCCAGGGCCAGCCCAAGCACTACCGCATGGACGGCCCGGACAAACTGCGCATCAGCCTCGACCTGCCGGAGCCGGCGGCCCGCCTGCAGGCCGCACGTGGCCTGCTGACCGCGCTGCATCCGGATCAGTAG
PROTEIN sequence
Length: 1167
MTSRMADSPLSIPVPLPRPGQLRAWWRAPASGTALALAALAAAHRHPGPLLLVARDNHTAHQLEADLRTLTGGDLALPVLGFPDWETLPYDRFSPHPDITSQRLATLARLPTLTRGMVVVPAATLMQRLAPRSHVLGGRFDVRVGQRLDLGAEQRRLEAAGYRHVPQVFDPGDFAVRGGLLDVYPMGAEAPFRIELLDDEIDSIRTFDPDSQRSLDRCEAITLLPGREVPMDEAHVQRALEALREQFDIDTRRSALVQDLKAGLTPAGVEYYLPLFFAPQRDTGLSTETLFDYLPADALPLLCEGALEAAEQTWAQIGQRHEQLRHDLERPLLPPEALWQPPEALRERLNRSVRIEVCGAAHPRHGEAHVLPLQPAPSLPLATRDHAPGEALRAFLAQSPGRVLIAADSPGRREALLDVLQAATLAPKVVEGWPAFAAGDARFAIAVAALDDGFALDAPPLCILTERQLFPERASQPRRRKRAGREPEAIIRDLGELTAGAPIVHEDHGVGRYRGLVAMDVGGLPGEFLEIEYAKGDRLYVPVAQLDRISRYSGANPDTAPLHNLGGEQWAKAKKKAAEKVRDVAAELLEIQAKRHARQGLAIDVDRALYEPFAASFPFEETPDQHAAIEAVLRDLQSSLPMDRVVCGDVGFGKTEVAVRAAFAAASSGKQVAVLVPTTLLAEQHYRNFRDRFADWPLRVEVLSRFKSKKEIEAELQKLAEGKLDVIVGTHRLLQPDVKFADLGLVIVDEEQRFGVRQKEALKKLRANVHLLTLTATPIPRTLNMAMSGLRDLSIIATPPANRLAVQTFVHAWDEALLREAFARELGRGGQVYFLHNDVESIGRMHDQLQALVPEARIGVAHGQMPERELERVMLDFHKQRFNVLLCTTIIESGIDIPNANTIIIHRADKFGLAQLHQLRGRVGRSHHRAYAYLLIPDRRSITEDARKRLDAISAMDELGAGFTLATHDLEIRGAGELLGEGQSGQMAEVGFSLYTELLERAVRSIKQGKLPDVDDVDRHGAEVDLHIPALIPDDYLPDPHTRLTLYKRISAARDEAALRELQVEMIDRFGLLPDPARHLFAVAELKLAATRLGIRKLDLGAGGGRLQFVEKPNVDPMAVIRLIQGQPKHYRMDGPDKLRISLDLPEPAARLQAARGLLTALHPDQ*