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SCN18_25_8_15_R4_B_scaffold_71_357

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 366454..368142

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003611179 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 559.0
  • Bit_score: 513
  • Evalue 2.50e-142
polypeptide-transport-associated domain-containing protein shlb-type similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 552.0
  • Bit_score: 505
  • Evalue 1.90e-140
Polypeptide-transport-associated domain protein ShlB-type {ECO:0000313|EMBL:ADU34761.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 552.0
  • Bit_score: 505
  • Evalue 9.60e-140

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGCCGGGCATCAACCGAAATCTGCTGGCACTGGCGGTGGCACTGGGCAGCGTGGTCGCGGCGCAGGCCCGGGCGGGCACTGTGCCGCCGGACCCGCCCTCCGGCGAGAAATCCGCTGCGGTTCCCGCGTCCGCACCCGCTGCGGCCGATCCGCAGCAGGCGCAGTCCTTGCCAGAACCTCCGATTGCCGCAGCGGCGCAGACCAGCTTCGTGCTGCGCGCGGTCGAGTTCAGCGGCGTCAGCGGGGTTCCGGAGGCGGAGCTGCAGGCCGCGGTGGCCGGGTGGATCGGCAAGCCGGTGACGCTGGCGGATCTCGAACGGCTGGCCGCGCGCGCGGCGGCGGTCTATCGCCAGCATGGCTTCGCGCTTGCACAGGTGTTCGTTCCGGTGCAGGAGGTGGTGGACGGGCGCGTGCGCCTGAGCGTGGTCGAAGGCCGGCTGGGCGCGGTGGACATCGAGGTGGCGCCGGAGGCGCCGATCACCCGCGAGCGGGTGGCGCGCACGCTGGCGATCCTGGAGCCCGGCAAGCCGCTCAACAACCGCGACTACGAGCGCGCGATGCTGCTGCTGTCGGACCTGCCGGGTATCCGCCCGCAGTCGGCGGTCAGCGTCGGCGACGCATCGGGCAGCAATGATCTGAGCGTGCGCGTGGGCGCGCAGCCCCGCCTGAAATACGGCCTGGAACTGGATGATTACGGCACCCGCGATTCCGGGCGCGTGCGTTTGACCGGCAGCCTGCGCTGGGCCAGCCCGTTCGAGCGCGGCGACAACCTGGACCTGCGGCTGATGATGGCGCAGGGCATGCACACCGCGTTCGGGCGCCTCTCCTACGAATCGCCCGTCGGCTATTCCGGCCTGCGCCTCGGTGGCGGCCTGGCGCGGGTGCAGTACGAGCTGGGGGGGCCGTTCGCCCCGCTGAAGCCGACCGGCGTCGGCAATGTGGCGGATCTGTCGTTCAGCTACCCGCTGATCCGCCAGCGCACCACCAACCTGTTCCTGCGTGGTGCTCTCGACGACAAGCATCTGACCGATCGCTTCGAGGCGGTCGGATTCACCACCCGCAAGCGGATCCACGGCATCAGCCTGGGGTTGGCGTTCGAGCGTCGTGACCGCTGGGGCGGCGGCGGGTACTCCAGCGTCAATGCGCAGCTCTATCGCGGCAAGCTCGATATCCGCGACCCATTGAGCCGGCTGTTCGACCGCCCGCCGTTCGGCTATGGCACCCAGGGCGAATTCACCAAGTTCACCCTGCAGGCCGCCCGGCTGCAGTACCTGGCGCCACGGCTCAGCCTGTTCCTCGGGCTCGGGCTGCAGCGCGCCAACAAGAATCTGGATGCCTACGAAAAACTCTCGCTGGGTGGCCCCAAGGCGGTGCGCGCCTACGCCATTGGCGAGGTGCTGGTGGACGACGGCTGGATCGCCACCGCCGAGCTGCGGCATCCGCTGAGCGCACAGACCACGCTGTTCGCGTTCTATGACGCCGCGCAGGGCGACCAGTTCCACCGCGCGCGGCCGTTCGACCCGGACCTTTCGCGCAGCCTGCGCGGCTATGGGCTCGGGCTGAACTGGAGCAAGCCGGGCAACGTCACCGTCAATCTCAGCGTGGCCTGGCGCGGGACCGGGCCGGGCGTCACCGATGGCGGCGACCGCAATCCGCGGGTGTTCTGGACGATCCAGAAGGCGTTTTGA
PROTEIN sequence
Length: 563
MPGINRNLLALAVALGSVVAAQARAGTVPPDPPSGEKSAAVPASAPAAADPQQAQSLPEPPIAAAAQTSFVLRAVEFSGVSGVPEAELQAAVAGWIGKPVTLADLERLAARAAAVYRQHGFALAQVFVPVQEVVDGRVRLSVVEGRLGAVDIEVAPEAPITRERVARTLAILEPGKPLNNRDYERAMLLLSDLPGIRPQSAVSVGDASGSNDLSVRVGAQPRLKYGLELDDYGTRDSGRVRLTGSLRWASPFERGDNLDLRLMMAQGMHTAFGRLSYESPVGYSGLRLGGGLARVQYELGGPFAPLKPTGVGNVADLSFSYPLIRQRTTNLFLRGALDDKHLTDRFEAVGFTTRKRIHGISLGLAFERRDRWGGGGYSSVNAQLYRGKLDIRDPLSRLFDRPPFGYGTQGEFTKFTLQAARLQYLAPRLSLFLGLGLQRANKNLDAYEKLSLGGPKAVRAYAIGEVLVDDGWIATAELRHPLSAQTTLFAFYDAAQGDQFHRARPFDPDLSRSLRGYGLGLNWSKPGNVTVNLSVAWRGTGPGVTDGGDRNPRVFWTIQKAF*