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SCN18_25_8_15_R4_B_scaffold_131_42

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(47065..50997)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
ATP dependent RNA helicase {ECO:0000313|EMBL:KGQ18722.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 1318.0
  • Bit_score: 1900
  • Evalue 0.0
ATP-dependent helicase HrpA id=2582275 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 1324.0
  • Bit_score: 1684
  • Evalue 0.0
ATP-dependent helicase HrpA similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 1409.0
  • Bit_score: 1567
  • Evalue 0.0

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Taxonomy

CN-SCN_Arenimonas_307x → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3933
ATGCCGGCGCTTCCCGCCGACCCACGCCACGCCCGGCGCGCCATCGAGGCCGCGCTGGCGCGCGATCGTGGCCGCCTGCTTGGCCTGCTGGCGAAGTGGCAGGCCAAGCCCGGGACGGAGGCGCCGCGCGAGGCATTCCTGGCGTGCCTGCAAGCATCGCTGGCCGCGCGTGAACGCCGCGTCGCCGCGCTGCCGGCGCCGGGCGCGGTGGACCCGGCGCTGCCGATTGCCGCGCATGCCGAAGAGCTGGTCGACCTGATCCGCCGCCACCAGGTGGTGGTAGTGGCCGGCGAGACCGGCAGCGGCAAGACCACCCAGTTGCCGAAGCTGTGCCTGCAGGCCGGGCGCGGCGCGGCCGGGATGATCGGCTGCACCCAGCCGCGGCGGCTGGCCGCGCGCGCGGTGGCCCGCCGCGTCGCCGAAGAGCTGAAGGTCCCGCTGGGCGGTGCCGTGGGCTACCAGGTGCGTTTCAACGAGGCGGTCGGCGAGCAGACCGCGATCAAGTTCATGACCGACGGCATCCTGCTGGCGGAAATCCAGAGCGACCGCTGGCTGTCGCAGTACGACACCCTGATCATCGACGAGGCGCACGAGCGCAGCCTCAACATCGATTTCCTGCTCGGCTACCTCAAGCAGCTGCTGCCGCGCCGGCCCGACCTGAAACTGGTGGTGACCTCGGCGACCATCGACACCGCGCGCTTCGCGGCGCATTTCGGCGGCGCGCCGGTGGTGAGCGTGGAGGGGCGCGGCTATCCGGTGGACGTGCGCTACCGGCCGCTCGAGGGTGGCGGCGCGGAGGATGGCGAGGACGCCGGGCAGCGCACGCTGGTGGATGGCATCGTCGCCGCCTGCGACGAGATCCTGCGCGAGAAGGGCATCGGCGACACCCTCGTCTTCCTGCCCGGCGAGCGCGAGATCCGCGAGGCGCACCAGGCGCTGGAGCGGCGCAAGTACCGCCACACCGAAATCCTGCCGCTGTATGCGCGGCTCTCGGCCAGGGACCAGGACCGCGTGTTCCATCCAGGCCCACAGCGCCGCATCGTGCTGGCCACCAATGTGGCCGAGACCTCGCTGACGGTGCCGCGCATCCACTACGTCGTCGATCCCGGGGTGGCCCGGGTCAAGCGCTATAGCCCGCGCCAGAAGCTCGACCGCCTGCACATCGAGCCGGTCTCGCAGGCCAGCGCCAACCAGCGCGCCGGCCGCTGCGGCCGCATCGCGCCGGGCACCTGTATTCGCCTGTATTCGGAAGCCGACTTCGCTTCGCGCCCCGCGTTCACCGATCCGGAGATCCGCCGCGCGGCGCTGGCCGGGGTGATCCTGCGGATGCTGGCGCTGGGGTTGGGCGAGATCGACAAGTTTCCGTTCCTGGAACCGCCCGATCCGCGCGCCATTGCCGATGGCTGGCAGCAGCTCAATGAGCTTGGCGCGGTCGATGCCCAGCGCAGGCTCACCGCCATCGGCCGGACGATGGCGACGCTGCCGGTGGACGTGAAGCTGGCGCGCATGCTGGTCGCCGCCCACGCGCACGGCGTGCTGCGCGAGATGCTGGTGATCGCCAGTTTCCTGGGCATCCAGGATCCGCGCGAGCGTCCGGCCGATGCGCGCGCGGCCGCCGATGCCGCGCATGCGCAGTTTGCGGATGCAAAGTCCGAGTTCGTCGGCATCCTCAGGCTATGGGATGCCTACCGTGGCGCGCACGAAGAGTTGACGCAGTCGCAGCTGCGCAAATGGGCCGACCGGCATTTCCTCAGCTACCTGCGCCTGCGCGAGTGGTGGGAGCTGCATCGCCAGCTGAAGCTGCAGTGCGAGCAGCTGTGGCCACAAAGGGAGGCAGGTCCAGTTTCCGCGAACAGTGAGCCCGACCCCCTTTCCGATCCCGCCTCCTACGCGGCGCTGCATCGCGCCCTGATCGCCGGCCTGCCGACTCAGCTGGGCCAGCGCGCCGACAAGGGCCAGTACGCGGGGCCGCGCGGGCGCAAGTTCCAGCTGTTCCCCGGTTCGAAGCTCGCCAGCAAGCCGCCGCCGTGGCTGCTCACCGCCACCCTGCTCGACACCGAGAAGGTGTGGGCGATCACCAATGCCGCGATCGAGCCGGACTGGGCGATCGCCGAGCTGCCGCACCTGCTGGCGCGCCGCCACCACGACCCGCACTGGTCGCGCGCGCAGGGGCGGGTGGTCGGCAGCGAGCAGATCAGTCTGTTCGGGCTGGTGCTGGCGCCGAAGAAGCCGGTGCACTACGGCGCGCTGTTCCCCGAGGAGAGCCGGGTGATCTTCGTGCGCGAGGCGCTGCTGACCGGCGAGATCAACACCCGCAGCGGCTTCCTCGCGCGCAACCTGCGCACGCTGGAGCTGGCCCGGCAGGAGGAAGCCAAGCAGCGCCGGGTGGGGCTGGTGGTGGACGAGGACTGGCAGGCGCGCTGGTACCTGGACCGGCTGCCGCCGCACGTGCACAACGCGCAGGCGCTGGATGCCTGGTACGCGAAGCTGCCGAAGGACGCGAAGGCCGCGCTGGAGTGGTCGCGCGAGGACCTGCTGGTGGCCGACCAGACCGACGCCGCGCGCTTCCCGGCCTACCTCGCGCTGGGCGAGGCGCGGCTGGCGGTGCAGTACCGCTTCGCGCCGGGCGAGCCCGACGACGGCATGACCGTGGCGGTGCCGCTGCATCTGCTCAATGCGCTGGATCCGGCGCGGCTGTCGTGGCTGGCGCCGGGCTTCGTGGAGGACAAGGCGACGGCGCTGATCAAGTCGCTGCCGAAGGCGCTGCGGCGCAATTTCGTGCCGGCACCGGAGTTCGCGCGCGCGTTCGCGGAGGCCTTCCCGCAGCCGGACGCCGACAGCCTCGAAGGCGCGCTGGCGCGCTTCCTGAACAAGTTGTCCGGGGTGGAGGTCGCCGCCACCGATTTCGACCTGGCCGCATTGGAGCCGCACCTGCGCGCCAACCTGCGCCTGCTGGACGGCAAGGCGGTGCTGGCCGAGTCGCGCGACCTCGATGACTTGCGCGCCCGCTTCGGCGCGCGCGCAGCACAGGCCTTCGCGCGCCACGCCGCGCAGGGCATGGAAAAGACCGGGCTGACCGCATTCCCCGATACTCCGATCCCGCTTTCGGTGCCGGGCCCGGGCGGCGTGCCGGCCTACCCCGCCTTGCAGGACGACGGCGACAGCGTGTCGCTGGCGCTGCACGCGCAGCGCGAGGTGGCCGAGCGCCTGCATCCGCAGGGCGTGCGCCGGCTGCTGGCGATCGCGCTGGCCGACAAGCTCAAGCAGGCGCGCAAGCAGCTGCCGGTGCCGCCGAAGCTCTCGCTGCTGTATGCCGCCATCGAGTCGGAGTCGCCACGCAAGGATGGGCTCAAGGACGCCGACCGCCTGCGCGCGGACCTGGTCGATGGCGCGTTCGTCGCGCTGGGTGCCGACGGCCTGCTGGGGATTCGCGACGCCGAGGCATTCGCGCAGCGCCGCGACGCGCTCGCACGGGCGCTGTTTGGCGAGGCGATGCAGCGGCTGCGGCAGGCCGAAGTCATCCTCGGCCTGATTGCCGAGGTGCGCGCCAAACTGGAATCGAAGCTGATCGGCTGGGCGCGCGCCAACCTGGACGACATGCAGGCGCAGCTGGACGCGCTGGCCGCGCCGGGCTTCCTGCGCGATACCCCGGCCGACGCGCTGGCGGAATACCCGCGCTACCTGAAGGCGCTGGCGCTGCGCGCCGAGCGCGCCCAGCGCGACCCCGGCAAGGACCAGGCGCGGATGCTGGAACTGGCGCCGTTCCAGCAGGCGCTGGCGGCCGCCGATCCGCTTGATCCGCAGGCGCGCGCGCTGCGCTGGGATCTGGAAGAACTGCGCGTGCAGCTGTTCGCGCAGGAGCTGGGCGCGAAAGGCGCCGTTTCACCCAAGCGGATGGCGGTGCGGCTGCAGCAGCTGCGCCTGCGCGAGTGA
PROTEIN sequence
Length: 1311
MPALPADPRHARRAIEAALARDRGRLLGLLAKWQAKPGTEAPREAFLACLQASLAARERRVAALPAPGAVDPALPIAAHAEELVDLIRRHQVVVVAGETGSGKTTQLPKLCLQAGRGAAGMIGCTQPRRLAARAVARRVAEELKVPLGGAVGYQVRFNEAVGEQTAIKFMTDGILLAEIQSDRWLSQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLVVTSATIDTARFAAHFGGAPVVSVEGRGYPVDVRYRPLEGGGAEDGEDAGQRTLVDGIVAACDEILREKGIGDTLVFLPGEREIREAHQALERRKYRHTEILPLYARLSARDQDRVFHPGPQRRIVLATNVAETSLTVPRIHYVVDPGVARVKRYSPRQKLDRLHIEPVSQASANQRAGRCGRIAPGTCIRLYSEADFASRPAFTDPEIRRAALAGVILRMLALGLGEIDKFPFLEPPDPRAIADGWQQLNELGAVDAQRRLTAIGRTMATLPVDVKLARMLVAAHAHGVLREMLVIASFLGIQDPRERPADARAAADAAHAQFADAKSEFVGILRLWDAYRGAHEELTQSQLRKWADRHFLSYLRLREWWELHRQLKLQCEQLWPQREAGPVSANSEPDPLSDPASYAALHRALIAGLPTQLGQRADKGQYAGPRGRKFQLFPGSKLASKPPPWLLTATLLDTEKVWAITNAAIEPDWAIAELPHLLARRHHDPHWSRAQGRVVGSEQISLFGLVLAPKKPVHYGALFPEESRVIFVREALLTGEINTRSGFLARNLRTLELARQEEAKQRRVGLVVDEDWQARWYLDRLPPHVHNAQALDAWYAKLPKDAKAALEWSREDLLVADQTDAARFPAYLALGEARLAVQYRFAPGEPDDGMTVAVPLHLLNALDPARLSWLAPGFVEDKATALIKSLPKALRRNFVPAPEFARAFAEAFPQPDADSLEGALARFLNKLSGVEVAATDFDLAALEPHLRANLRLLDGKAVLAESRDLDDLRARFGARAAQAFARHAAQGMEKTGLTAFPDTPIPLSVPGPGGVPAYPALQDDGDSVSLALHAQREVAERLHPQGVRRLLAIALADKLKQARKQLPVPPKLSLLYAAIESESPRKDGLKDADRLRADLVDGAFVALGADGLLGIRDAEAFAQRRDALARALFGEAMQRLRQAEVILGLIAEVRAKLESKLIGWARANLDDMQAQLDALAAPGFLRDTPADALAEYPRYLKALALRAERAQRDPGKDQARMLELAPFQQALAAADPLDPQARALRWDLEELRVQLFAQELGAKGAVSPKRMAVRLQQLRLRE*