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SCN18_25_8_15_R4_B_scaffold_319_14

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 13153..13983

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 275.0
  • Bit_score: 362
  • Evalue 4.90e-97
diaminopimelate epimerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000373EC4F similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 275.0
  • Bit_score: 365
  • Evalue 2.40e-98
diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 275.0
  • Bit_score: 362
  • Evalue 9.90e-98

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGCATTTCAGCAAGATGCACGGCGCCGGCAACGACTTCGTCGTGCTGGACCTGCGCGACGGCCGCGCGCCGCCCACGCCCGCCGAGTGCGCGCGGATCGCCGACCGCCATTTCGGCGTCGGCTGCGACCAGCTGCTGACGATCGAACCGGCGCCCGGCGCGGATGCGGTGGCGTCCTACCGGATCTGGAACGCCGACGGCAGCGTGGCCGGCCAGTGCGGCAACGGCGCGCGCTGTGTCGCGGCCTGGCTGGTGCGTGCGGGCGCGGCGCCGGCACAGGACGCCTTCGTGATCACGAGCCCGGCCGGACGGCACCCGGTGCGACGCAATGCGCGCGGCGATTTCGTGATCGACATGGGCGCGCCGCGCTTTTCCCCGGCAGACGTTCCACTGCGCGGCTTTGCGCAGACGCAGGACGCCTACCCGCTGCAGATCGACGGCCGCACGCTTGCGATCGGCGCGGTCTCGCTGGGCAATCCGCACGCGCTGCTGGAAGTGGACGCGGTGGACCGCGCGGACGTGGCCGGCATCGGCGCCGCCCTGCAGGGACACCCGGCCTTTCCGCAGTCGGTCAACGTCGGCTTCGCCCAGGTGCTGGCGCCGGACCGCCTGCGCCTGCGGGTGTACGAGCGCGGTGCCGGCGAGACCCTGGCCTGCGGCAGCGGCGCCTGCGCGGCGGTGGCGCTCCTGGATCGGCGCGGCCGGGTGCGCGCGGCCGCCGGCGTGACGGTCGCACTGCCGGGCGGGGAACTGCGCATCCAGCAAGAGGCCGACGGCCATCTGTGGATGGCCGGCCCGGCCGCATTCGTCTTCGAAGGAGACATCCCGTGA
PROTEIN sequence
Length: 277
MHFSKMHGAGNDFVVLDLRDGRAPPTPAECARIADRHFGVGCDQLLTIEPAPGADAVASYRIWNADGSVAGQCGNGARCVAAWLVRAGAAPAQDAFVITSPAGRHPVRRNARGDFVIDMGAPRFSPADVPLRGFAQTQDAYPLQIDGRTLAIGAVSLGNPHALLEVDAVDRADVAGIGAALQGHPAFPQSVNVGFAQVLAPDRLRLRVYERGAGETLACGSGACAAVALLDRRGRVRAAAGVTVALPGGELRIQQEADGHLWMAGPAAFVFEGDIP*