ggKbase home page

SCN18_26_2_15_R1_F_scaffold_748_15

Organism: SCN18_26_2_15_R1_F_SCNPILOT_EXPT_300_BF_Thiobacillus_62_448_63_78

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38
Location: comp(13772..14176)

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal body rod protein FlgC n=1 Tax=Thiobacillus thioparus RepID=UPI000380CFBC similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 134.0
  • Bit_score: 256
  • Evalue 1.30e-65
flagellar basal body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 134.0
  • Bit_score: 236
  • Evalue 3.10e-60
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 259
  • Evalue 2.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Thiobacillus_62_448 → SCNPILOT_EXPT_300_BF_Thiobacillus_62_448 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGTCACTGTCCAACATCTTCAGCGTGGCCGGCTCGGCCATGAACGCCCAGTCGCAGCGGCTGAATACCGTCGCCAGCAACCTGGCCAACGCCGACAGCGCGACCAGCGCCGACGGCACGCCCTACAAGGCCAAGCAGGTCGTGTTCGCCGCCACGCCGGTAGGCGAGAACGGCGCGACCGGGGTGAACGTGGCCGCGGTGGTCGAGGATCAGTCGCCGATGAAGCAGGTGTACGACCCCAAGAATCCGCTCGCCGACGAGAAAGGCTACGTGACCATGCCCAATGTCAATGTGGTGGAGGAGATGGTCAACATGATCTCCGCCTCGCGCTCGTACCAGTCCAACGTGGACATGATGAATACCACCAAGACCCTGCTGCTCAAGACCCTGAGCCTGGGACAGTGA
PROTEIN sequence
Length: 135
MSLSNIFSVAGSAMNAQSQRLNTVASNLANADSATSADGTPYKAKQVVFAATPVGENGATGVNVAAVVEDQSPMKQVYDPKNPLADEKGYVTMPNVNVVEEMVNMISASRSYQSNVDMMNTTKTLLLKTLSLGQ*