ggKbase home page

SCN18_26_2_15_R4_B_scaffold_571_8

Organism: SCN18_26_2_15_R4_B_Rhodanobacter_69_138

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 9558..11801

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KGE9_SHEWM similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 566.0
  • Bit_score: 525
  • Evalue 8.50e-146
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 566.0
  • Bit_score: 525
  • Evalue 2.40e-146
TonB-dependent receptor {ECO:0000313|EMBL:ACA88286.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 566.0
  • Bit_score: 525
  • Evalue 1.20e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_P_Xanthomonadales_69_150 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
ATGACCCGATTGGCCCGGCCTGATGGCTCCCGATGCTCGCCCGCATCGCCCTGGCGAAAGCTGACCTGCCTGAGTGTCAGCGTTGCCGTGGGATTGTATGGCATGCCGTTCTTCGCCTCCGCACAGGAAACAGCGACGAACTCGGACACGCCTGCGAACCAGGCGCCGCCCCCTCCCGCACAAGGCACGCAGACCAAGGCATCGAAGAAAAAAAATGCCGTGACCCTCACCGAGGTCACCGTGACGGCGCGCCAGCGCTCCGAATCCATCAAGGACGTACCGATTGCGATCACGGCGTTCACCGATCAGCAGATCGAGGATGCGGGCATTCAATCGCCAGCGGATTTCGTGCAGCTGACGCCCAACGTGAGCATGGTGCAATCGCAGAACGCGGGCACCGACTTTCTCACGATTCGAGGCATCACCCAGGTACGCAACGGCGACCCGCCGGTGGCTACCGTGGTGGACGGCGTGCAACAAGTCAGCCCCAACCAGTTCAACCAGGACCTTTACGACCTCGACAGCATCGAGGTGCTGAAAGGCCCACAAGGCGCGCTCTACGGCCGCAACGCACTGGGCGGCGCGATTCTGATCAATACCAAGCTGCCTTCCGATACTCCTGCCGGCTGGATCAAGGTTGGTGTTGGCAACGGCCACTATCGAGACGGGGCTTTCAGCTTCAGCGGCCCGATCGGCAACGGCAAGGTGCGCTATCTGCTGTCGGGCATCGACAACTTCTTCGGCGGCCTGATCCAGAATGATTACCTGCACAGGCCCGTGGACAACGCACGTAACCGGGGACTTCGCCTGCGCGTGCTGGCCGACGTCACCGACCACTTCACGCTCGATACGCAGGCCAGCAGCTCCCGCACGATCGGCGGCTCCCTGAACTACGTGTACCAGCCGCTCTACGGCGTCGACGACGTCAACAACACCTCGATTCCGATCACGGCCAACAACAAGGGCTATGACATCCGGACCATCGATCATTTCTCGATCAAGGGCGACTACCAGACCAGCGCGGGTACCTTGACTGCCATCGCTGCACTGGATCACATCAACGAGTATTACGACGGGGACAACTTCCCCTACACGCCGGCCATTTCCGCGAATTCACCGTTGGGCCCGGGAACCGATGGCACCCAAGCCCAGTACCTGGACACCAACGCCAGGCAGGTCGAACTGCGATTCACTTCGCCCTCGGACGAGCCCCTGCGCTGGATCGCGGGAACTTCGTTCCTTCATACGGACAGCTATCTGTCCAACACCATCGGCCTGGATCTTGGCCGCGGCATCATTCGCGTCAAGAAGACGCCGGCACCCGCCAACAGCCGGAATCCGACATCATCCTTCCTCGCCGATCGCGCCAGCGAGAACAACTCGTCGATTTTCGGACAGGTGGCCTACGACATCACCCCGAAGCTGGAAGCGGATCTGGCGTGGCGCTACGACCGCTTCCAGCTCACCCAACGCGATGTCTCCCTGCCCCAATTCGACCCCTTTGCCGGGCAGGTCCGCCATGGCACGTTCAGCAAGTCGCAACCCAAATTCACCCTTACCTACAAGGCGAACACGGACTTCACCTTCTACGGAAGCTGGGGTGTGGGGTTCCGCAGCGGCGGGTTCAACCAGAACGGTACCGGTGCGGATGCGGCAAGCGTGGGGTTGATCGGCGTCAGCGATCTTTACCAGCCTGAAACGGCCAAGAGTGCCGAACTGGGGTTCAAGAGCTCGCTGGACGACAATCGGCTGCAAATCAACGGCAGCATGTTTGACACCCGGGATCGCAATCAACTGTATTTCGTCTTCGTCGGGGCGCTTGGCGCGCAGGTGCTGACCAACATCGACAAGGTGGATCTGCGTGGCTACGAACTGGATGCCAAGTTCCGCGTCCTCGACGACCTGACCGTGTATGGCGCTTACCGGGTACGCAGCGACGGTTGCTTCCTGACGGCTTCGTACTCGCGCAACAAGCATCATCCCTGGGGCTTGCAAGGCGGCAGGGAAGGTTCCTCGAACTACGTGCGCGTGATCCGGGCCAACGGTGAGACCCGGGACTTCGCCGTAGTCACCTCGCTGGAGGTCAATCGAGACGACGTCATTCGTATCGTCACGGCCAACGGCGGCGGCTATGGCGATCCAGCCAAGCGATCGCGAGAAGCCATCGTCTCCGACCTCAAGAACGGTTACCTCGATGCTCGCCGGGCGGCTGATGTTTACGGCTACCGCCACGAGGCAGGCTGA
PROTEIN sequence
Length: 748
MTRLARPDGSRCSPASPWRKLTCLSVSVAVGLYGMPFFASAQETATNSDTPANQAPPPPAQGTQTKASKKKNAVTLTEVTVTARQRSESIKDVPIAITAFTDQQIEDAGIQSPADFVQLTPNVSMVQSQNAGTDFLTIRGITQVRNGDPPVATVVDGVQQVSPNQFNQDLYDLDSIEVLKGPQGALYGRNALGGAILINTKLPSDTPAGWIKVGVGNGHYRDGAFSFSGPIGNGKVRYLLSGIDNFFGGLIQNDYLHRPVDNARNRGLRLRVLADVTDHFTLDTQASSSRTIGGSLNYVYQPLYGVDDVNNTSIPITANNKGYDIRTIDHFSIKGDYQTSAGTLTAIAALDHINEYYDGDNFPYTPAISANSPLGPGTDGTQAQYLDTNARQVELRFTSPSDEPLRWIAGTSFLHTDSYLSNTIGLDLGRGIIRVKKTPAPANSRNPTSSFLADRASENNSSIFGQVAYDITPKLEADLAWRYDRFQLTQRDVSLPQFDPFAGQVRHGTFSKSQPKFTLTYKANTDFTFYGSWGVGFRSGGFNQNGTGADAASVGLIGVSDLYQPETAKSAELGFKSSLDDNRLQINGSMFDTRDRNQLYFVFVGALGAQVLTNIDKVDLRGYELDAKFRVLDDLTVYGAYRVRSDGCFLTASYSRNKHHPWGLQGGREGSSNYVRVIRANGETRDFAVVTSLEVNRDDVIRIVTANGGGYGDPAKRSREAIVSDLKNGYLDARRAADVYGYRHEAG*