ggKbase home page

SCN18_30_10_14_R3_B_scaffold_71_5

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(2347..5025)

Top 3 Functional Annotations

Value Algorithm Source
carboxysome shell protein id=12496251 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 892.0
  • Bit_score: 1762
  • Evalue 0.0
carboxysome shell protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 922.0
  • Bit_score: 1021
  • Evalue 7.50e-296
Carboxysome shell protein CsoS2 {ECO:0000313|EMBL:ADG29530.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 922.0
  • Bit_score: 1021
  • Evalue 3.70e-295

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2679
ATGACATACGCCGCAGAAAGCGCCGCCAGCGCGACCCTCTCAGGGCGCGAACTGGCGCTGAAGCGCCGGCAGGCCATGGCCCTGCACGGCAAGAGCGGAATCGCCAAGAGCGGCGCGGCCCAGCCGCGTCCGACGGCGGCCAGCAGCCCGGACGCGCCTGCAACCCGCAGCGAACCGGCCGGCTACGTGGCGCCCGCCCGTGCCGACGACCAGATGGTGATTGCCCAGTTACGCAGCGCGTCGAACGTCAGCGCCGCGCGTGCCCGTCGCGAAGCGCTGTCGCGCGCCGGCAAGGCCGCACTGCAACAGACCGCGGCGGTCCGTCCGTCCGGACGCGCCCGCCCGCAACGCGAAACGGCGGCTGCGACCGAAACGGCGGCAGCTCAGCCCGCCGGCTGCGGGTGCGGCTGCGGCGGCACCAATCCGGCCTGTGGTGCCACGGTTGCGCCTGCCGCAGCCGTGGCCGAAGCGGCGCCGCTGCGCGTTGCCAGGACCGTCGAACAGCCCACCGGCCGCGCGCTCGCCCGTGCTCGCCGTGCGGCGCTGGCGCAGGACGGCAAATCGGGTCTCAAGCGCGTCGCCCAGGCTACCAAGATTGCCGCCGCCCTGCCGGGGCAGGATTGGCAGGCTGCGATCGCCAAGGGCGCGACCGGTCGTCAGGTTGCCATGCAGCGGCGTCTGGTGCAGTCGCTGGCCGGCCGGGCCGGCGCGAGCAAAGCCGACACCCGCCCGACGGGCCGCATGCGTGCACGCGACCTGAAGGCCGTGCCGTCCAAAGTCGAGGAAGGCCACACGCTGTCAGGTCAGTCCGTTACCGGCACGTCCACCGATCGCAGCCGCAAGGTTACCGGCAACGAGCCGGGCGCCTGCCGCCCCGTCACGGGGACTGAATACGTGGGTGCCGAGCAGTTCGATGCCCTGTGCGAAGCCCGTCGTCCGTCGCCGAACCCGGCCAAGGTCGGTGTGGGCAGCACGCTGCGCGAGCATCGCGTGTCGGGCACCGAAGTCGGCCGTTCGCAGAAAGTGACCGGCGACGAACCCGGCGCCTGTCGCGGCATCACCGGTACCGAATACCTGTCGGCCGAACGCTACGCCGAGTTCTGCGCGAGCAAGCCTGCGCCCGCCCCGGCCAAGGTGGGCGAAACGCAAACCCACAAAGGCGAAACGCTGACCGGCACCATGGTGGGCCGGTCCGACAAGGTCACCGGCGATGAGCCGGGCGCCGACCGCACGCTGACCGGGACCCGCTACATGGCGAACGGCGCGGATGGCGCACCCGACAAAGTGGCCGTCACGCATACTGCCGGCGGCAAGCCGGTCACCGGTACGGCCGTGGGCCATGCCGCCCGAATCACCGGCGACGAGCCGGGTGCCTGTCGTGGCATCACCGGTACGCAATATCTCGCGGCTGAACAGTTCGGCGGCGCCTGCGGCACCGAAGTGCCTGCGCATCCGCGCAAGGTCAGCGTGATGTCTTCGCACGACAGCGAGACCGTTACCGGCGTCGATGTCGGTCGTGCCGACAACGTCACCGGCAACGAGCCGGGATCGTGCCGCGGCATTACCGGCAGCCAGTACTACACGCAATCGGATTTCGCGCCCCTGTGCAAGACCGGCAACGCCGGTCCGCGCAAGGTCAGCGTCATGCCGACGCTCGGCGGCCGTGCGGTCACCGGCACCGAGGTGGCGCCCAGCCCAAAATTGTCCGGTGACGAGTCCTACGGGTGCAAACCCGTCACCGGTATCGACTATGTCGGCACGGCGCAGCTTGCGGCCGTGTGCGACGTGGGCACCCAGGAAGCCGTTGCGCCCGTTGCCAAGGTGGCTGTCGACAGCACCTTGCGCGGGCAATCGGTGACCGGCAGTTATCCCGGCCGCGCCAATCGCGTGACCGGCAATGAAATGGGCGCCTGCGCGCCGGTTTCCGGCACGCCCTATGTGGGGCGCGGCCAGTTCGAGGCGTTTTGCCAGGCACCGGAATTCGACGCCCAGGCAGCGCGTGTGCGTGAGTCGGCCGTGATTCCCGCTACCGCCGTCACCGGCGACCGTCCGGGTTCCGGCGGCTCGGTGATGACCGGCGACGAACGCGGCGCGTGTGAAGTGATTTCCGGCACGCCCTACGTCGGCGCGGACAACAGTGCCTCGCAGTGCGCCGCCAGCGGCCGCTTCGTGTCGCGCACACGCAGTTTCGAAACGCCTTCACGCGTACCGGCACCGGCTGATTTCAGCATCGAGACGCCCGCCCGCTATGCCCAGCGCCAGCGTTTCGAGGATGTCACCGGCAATTCGTTTGCCGTGGAGCGGATTACCGGTCCCGTCAACAAGGCCGGCGGTCTGATCACCGGCACGCCCGAATTCCGCCACCGCGACAATGCAATGGCGCAGGTCGAACAGGCTGATGCCATCGCCGCCGCGCGCCGCCTGACCGGCGAAGGTCGCGAAAGCACACGCATCACCGGCGACGCCTGGCATGCCGAAACGCGCGTGACCGGCACAGAAGGCACATCGAGCCTCGGACGCAATTCGTCGCTGCGCGGCCAGCCGCGCGGTGCCGGTGTCAATGCGCGCGCGTTCCGCGAAATCGAGCGTGCCGACGTGCCCGATTCGCCCATCACCGGCTCGTCCGGCAACACCAAGCGCGGCGCGACCGTCACCCTGTCGGGCGGCGCGCGGGGATAA
PROTEIN sequence
Length: 893
MTYAAESAASATLSGRELALKRRQAMALHGKSGIAKSGAAQPRPTAASSPDAPATRSEPAGYVAPARADDQMVIAQLRSASNVSAARARREALSRAGKAALQQTAAVRPSGRARPQRETAAATETAAAQPAGCGCGCGGTNPACGATVAPAAAVAEAAPLRVARTVEQPTGRALARARRAALAQDGKSGLKRVAQATKIAAALPGQDWQAAIAKGATGRQVAMQRRLVQSLAGRAGASKADTRPTGRMRARDLKAVPSKVEEGHTLSGQSVTGTSTDRSRKVTGNEPGACRPVTGTEYVGAEQFDALCEARRPSPNPAKVGVGSTLREHRVSGTEVGRSQKVTGDEPGACRGITGTEYLSAERYAEFCASKPAPAPAKVGETQTHKGETLTGTMVGRSDKVTGDEPGADRTLTGTRYMANGADGAPDKVAVTHTAGGKPVTGTAVGHAARITGDEPGACRGITGTQYLAAEQFGGACGTEVPAHPRKVSVMSSHDSETVTGVDVGRADNVTGNEPGSCRGITGSQYYTQSDFAPLCKTGNAGPRKVSVMPTLGGRAVTGTEVAPSPKLSGDESYGCKPVTGIDYVGTAQLAAVCDVGTQEAVAPVAKVAVDSTLRGQSVTGSYPGRANRVTGNEMGACAPVSGTPYVGRGQFEAFCQAPEFDAQAARVRESAVIPATAVTGDRPGSGGSVMTGDERGACEVISGTPYVGADNSASQCAASGRFVSRTRSFETPSRVPAPADFSIETPARYAQRQRFEDVTGNSFAVERITGPVNKAGGLITGTPEFRHRDNAMAQVEQADAIAAARRLTGEGRESTRITGDAWHAETRVTGTEGTSSLGRNSSLRGQPRGAGVNARAFREIERADVPDSPITGSSGNTKRGATVTLSGGARG*