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SCN18_30_10_14_R3_B_scaffold_71_6

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(5155..5481)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] id=12496250 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 225
  • Evalue 1.50e-56
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 4.80e-48
Ribulose bisphosphate carboxylase/oxygenase small subunit {ECO:0000313|EMBL:AAD02446.1}; Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ADG29529.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ADG29529.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 2.40e-47

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGCCGTACAAGCCTACAAAGCCGCGACCAAGTACGAAACCTTCTCGTACCTGCCCGCGATGACCGCCGACCAGATCCGTCGCCAGATCGCCTACGCAATCTCGCAGGGTTGGAACCCCGCCGTGGAACACAGCGAAAAGGGCGTGTCCGCCCGCGTGAACTACTGGTACATGTGGAAGCTGCCGATGTTCGGCGAACAGTCGGTCGACACCGTGCTGGCCGAAATCGAAGCCTGCCACCGCGAGTTCCCCAACCATCTGGTTCGCTTCATTGCGTATGACAACTACGCACAGAGCCAGGGCATGGCTTTCGTCGTCTACCGTTAA
PROTEIN sequence
Length: 109
MAVQAYKAATKYETFSYLPAMTADQIRRQIAYAISQGWNPAVEHSEKGVSARVNYWYMWKLPMFGEQSVDTVLAEIEACHREFPNHLVRFIAYDNYAQSQGMAFVVYR*