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SCN18_30_10_14_R3_B_scaffold_85_14

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 14626..16581

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein D; K02453 general secretion pathway protein D id=12498174 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 651.0
  • Bit_score: 1258
  • Evalue 0.0
type II secretion system protein D similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 651.0
  • Bit_score: 845
  • Evalue 5.30e-243
Type II secretion system protein D {ECO:0000313|EMBL:AAZ97392.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 651.0
  • Bit_score: 845
  • Evalue 2.60e-242

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1956
TTGTTTCCCCACCGTTTCGCCCTGTTGTTCGCCGCCGGGATCGCCGCCCTGATCGCCGGCTGCGCCAGCCCCGGCCTCAAGGAAGGCCGCGCCCTCATCGACGCGGGCCAGCCGGAAGCCGGCATCGCACGCCTGCGCGCAGGCATTGCCGAGGAACCCGGCAATCTCGAATTGAAAAGCTACTATCACACCCAGCGCGAACGCCTGGCCGGCGAATGGCTCACCCGCGCACAGCAGGAAATCGACGCGGGCCGTTTCGACACGGCCGAGGCGATGTTGCTGCGGATTCAGGCGATTCATCCCGAAAGCCCTCGTGCGGCCGCGCTGCTGGCCGGCCTGGCCGACGCCCGCTCGAACGCGCGCGCGGCCGAGGCGGCCGGCCGCGACCTCGCCGCCGGCCGTCTGGAGCAGGCTGAACAGACCGTCCGCGAGGTGCTCGCACGCAGCCCGGATCATGCCGGCGCACAGGCCGTGCTGCGCGGAATCCAGACCGCCCGCACGGCGGACGAAATCGCGCCGCGCGCCCTGGATGCGGCCTACCGCAAGCCGATCACGCTGGAACTGCGCGATGCGCCACTGAAAAACGCCTTCGACATGATCTCGCGGCAGTCCGGCCTCAATTTCGTGTTCGACAAGGACGTGCGGCTCGACGGCAAGATCACGCTCTACGCACGCGGCACGCCGATCGCCGACGCCGTGGACATGATCCTGCTCACCGGCCAGCTCGCGAAAAAGGTGGTCAACGCCAGCACTCTGCTGATCTATCCCGACCAGCCGCAGAAACAGAAGCTCTACCAGGAGCTGATGGTGAAGAGCTTCTACCTCGGCAACGCCGACGCCAAATCGACCCTGGCGCTGCTGCGCAGCGTGGTGAAGACGCGCGACATCTACGTCGACGAACGCCTGAACCTGCTGGTGATGCGCGACACGCCCGAGGCGATCCGCCTCGCGGAAAAAGTCGTCGCGGTACAGGATCTGGCCGATCCCGAGGTAATGCTCGACGTCGAGGTGCTCGAAATCAAGCGCGGCCGTCTGCTCGACCTGGGCGTGCAGTATCCCAACCAGTTCTCGATGCTCAACACCCTGACGACCGACACCGCCTCGACCACCGGCGGCGTCATCGTCAACACCACCACGACCACGCTGTCGCCGCTGCCGCTCACGGTGGACAAGCTGCGCGACATCGCCGGCCGGGACATCGCGATGAACGGCCCGCAGGTCAACGTCAAAAAAGAGGACAGCGACGTCAACCTCCTCGCCAACCCCCGCATCCGCGTGAAGAACCGCGAAAAGGCCAAGATCCACATCGGCGACAAGGTGCCGGTGATCACCTCGAACGCCACCGCCACCGGCGTTGTCTCGGAATCCGTCTCCTATCTCGACGTCGGCCTCAAGCTCGACGTCGAACCCAACGTGCTGATGCGCGACGACGTGCAGATCAGGGTCGGGCTGGAGGTTTCCAACATCGTGCGCGAAATCCGCAGCAACAGCGGCACCCTCACTTACCAGATCGGCACCCGCAACGCCGGCACCACACTGCGCCTCAAGGACGGCGAGACCCAGGTGCTCGCCGGACTGATCTCGGACGAAGACCGCAGCGCAGCCAGTCGCGTACCCGGCCTCGGCGACCTGCCGCTGATCGGCCGCCTGTTCTCCAGCCAGCGCGACGAGCGCAACAAGACCGAGATCGTGCTGCTGATCACGCCGCGCGTGCTGCGCGGCATCCAGACCGACCGGCCCGCGCTGACCGAATTCCGCAGCGGCACAGACAATGCCGTCGGCGGCGGCATGAGCCTGCCGATGACGACCGCGCTGCCGAACGTGCCGGATCAATCCGGACCGCAATCGCCGGAACCCGCGCTCCAGCCGCCTCCGGGCCTGCCGCCGCCCGGTTTGCCGATTCCAACCCCGCTGCTGCCGCCGCCGCCCGGCCAGCCCATCGTCCCGACGGAATGA
PROTEIN sequence
Length: 652
LFPHRFALLFAAGIAALIAGCASPGLKEGRALIDAGQPEAGIARLRAGIAEEPGNLELKSYYHTQRERLAGEWLTRAQQEIDAGRFDTAEAMLLRIQAIHPESPRAAALLAGLADARSNARAAEAAGRDLAAGRLEQAEQTVREVLARSPDHAGAQAVLRGIQTARTADEIAPRALDAAYRKPITLELRDAPLKNAFDMISRQSGLNFVFDKDVRLDGKITLYARGTPIADAVDMILLTGQLAKKVVNASTLLIYPDQPQKQKLYQELMVKSFYLGNADAKSTLALLRSVVKTRDIYVDERLNLLVMRDTPEAIRLAEKVVAVQDLADPEVMLDVEVLEIKRGRLLDLGVQYPNQFSMLNTLTTDTASTTGGVIVNTTTTTLSPLPLTVDKLRDIAGRDIAMNGPQVNVKKEDSDVNLLANPRIRVKNREKAKIHIGDKVPVITSNATATGVVSESVSYLDVGLKLDVEPNVLMRDDVQIRVGLEVSNIVREIRSNSGTLTYQIGTRNAGTTLRLKDGETQVLAGLISDEDRSAASRVPGLGDLPLIGRLFSSQRDERNKTEIVLLITPRVLRGIQTDRPALTEFRSGTDNAVGGGMSLPMTTALPNVPDQSGPQSPEPALQPPPGLPPPGLPIPTPLLPPPPGQPIVPTE*