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SCN18_30_10_14_R3_B_scaffold_157_17

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(15461..16345)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12497962 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 294.0
  • Bit_score: 585
  • Evalue 1.60e-164
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 295.0
  • Bit_score: 395
  • Evalue 8.60e-108
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 295.0
  • Bit_score: 395
  • Evalue 4.30e-107

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGAAGATCGTCCGGCAACGCGTCAACGGTGTCCTGCTGCTGAACAAGCCGGTCGGACTGACTTCGAACGCTGCGCTGCAAAAGGCCAAGTGGCTGCTGGCCGCACTCAAGGCCGGCCACACCGGCACGCTCGACCCTTTCGCCGACGGGCTTCTGCCACTGTGCTTCGGCGAGGCCACCAAATTCTCGGCTTTCCTCCTCGATTCCGACAAGCGCTACCGCGCGACCATGCGTCTGGGCATCGTCACCGCGACAGGCGACCCGGAAGGCGAAATCCTTGCCGAACATCCCGTCACGGCCGATTGCGCGGCCGTCGCCGCAACGCTCCAGGGCTTCGTCGGCGAAATCCAGCAGATTCCCCCCATGCACTCTGCGCTCAAGCACCAGGGCCGCCCGCTTTACGAATACGCGCGCGCGGGCATCGAAATCGACCGTCCTCCGCGCCGGGTGCGCATCGCCGCACTCGATCTGGTCGAATGCGCGCCGCCGCGCGTCGTTTTCGACGTGCAATGCAGCGCCGGAACCTACGTTCGCACGCTGGCGCAGGATATCGGTGCAGCGCTCGGCTGCGGCGCACATCTCACCGGACTCACGCGCACCGCCGCCGGCGACTTCACCCTGGCCGGCGCCTGCGATCTCGCGACGCTGGAAAGCCTGTCGCCGGACGCTCGCCATGCCCGGCTGCTGCCGCCCGACAGCCTGCTCGAATACCTGCCCAGGGTATGCGTCGACGACAACGACGCGACCGCCCTGCGGCAGGGACGCGCCATCGCCCCGATCGAAACGCCGGCCGGCCTGGTGCGGCTATACGCTCCCGCAGGCTTTCTCGGTCTGGGCCAGGCCGACGCCGGGCGGATCGTGCCGCACAGGCTGACAGCCGCTTGA
PROTEIN sequence
Length: 295
VKIVRQRVNGVLLLNKPVGLTSNAALQKAKWLLAALKAGHTGTLDPFADGLLPLCFGEATKFSAFLLDSDKRYRATMRLGIVTATGDPEGEILAEHPVTADCAAVAATLQGFVGEIQQIPPMHSALKHQGRPLYEYARAGIEIDRPPRRVRIAALDLVECAPPRVVFDVQCSAGTYVRTLAQDIGAALGCGAHLTGLTRTAAGDFTLAGACDLATLESLSPDARHARLLPPDSLLEYLPRVCVDDNDATALRQGRAIAPIETPAGLVRLYAPAGFLGLGQADAGRIVPHRLTAA*