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SCN18_30_10_14_R3_B_scaffold_199_2

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 264..647

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=22 Tax=Proteobacteria RepID=A6V7M4_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 241
  • Evalue 2.40e-61
trbC; mating pair formation conjugal transfer TrbC transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 241
  • Evalue 6.90e-62
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AGI23814.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 241
  • Evalue 3.40e-61

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACGCAGATGACCATTCCTGCTTTCCGTTTTTCTGCAAATCCGGCTTTGCGTCTTGCGCGGCTGCGCTGCCTGGCCCGCCCTGCGGGGCAAGGGCTGCTGCTGGCCGCGCTGCTGTTGTTCCTGGCCGGAACCGCGCAGGCCGCCGGTTCCTCGATGCCGTGGGAAGGCCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCACGAATCGTCGCCGTCATCATCATCATCGCCACGGGCCTCGCGCTCGCTTTCGGCGACACGTCCGGGGGATTCCGCAAGCTGATCCAGATCGTCTTCGGTCTGTCCATCGCGTTTGCCGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCGGTCGTATGA
PROTEIN sequence
Length: 128
MTQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*