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SCN18_30_10_14_R3_B_scaffold_199_10

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 7531..8817

Top 3 Functional Annotations

Value Algorithm Source
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 id=12497665 bin=THIO_MID species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 428.0
  • Bit_score: 847
  • Evalue 3.30e-243
Conjugative transfer protein TrbI {ECO:0000313|EMBL:ETD47589.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 428.0
  • Bit_score: 847
  • Evalue 4.60e-243
conjugative transfer protein TrbI similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 428.0
  • Bit_score: 801
  • Evalue 7.60e-230

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGAGCCAGGACGACACTCCCGACCTTGCCACGCCGCATCCGGGCAAGGTCGCGCCCGAAGCGGTGGCGCTGCGCGCCCAGCCGCGCCCGGTCACGCGCCTGAATCGGCGCACGCTGGCCATCCTCGTCGGTGGCCTGTCGGTCGTCGTGCTCGGCGCCACGATCTGGTCGCTGCAACCGCAGCGGCGTGGCGCCAATGAGCAGACCGAGCTTTACAACGTCGATCGCGTGTCGAAGTCAGAAGGACTGGATGCGTTGCCGACGGACTACTCGAAGCTGCCGCCGGCCTTGCCGCCCGATGTGCCCGAGCTGGGGCCGCCGCTGCCGGGCGATCTTGGCCCGGCAATCGTGAACTCGCAGCAGCCGGTGACGCCGGCCTATGCGCCACCGGGGCATGATCCTGCGGATGCCTTGCGCAAGGAAGCTGATGCGGCGGCGGCTTCGTCGGTGTTCTTCCGCTCGGGCGGCCAAGGCCAAGCTGCCGCCACGGTGGCGCAGGCGGCGCCGGGTGCGCCTGGTGGTGCAAGCGCGCTCGCGGCTTTCGATCCACTCGGCGCTGGGCCGGCCTCGACCGCGGCCCAGCCTGCCGACCCGACTGCGGTGCAGAACCGGCAAGACCAGAAAGAGGCGTTCCTGAAAGGCGGCTCTACGGAAACCCGCAATTCCGGCAACCTGGCGCTGCCGGCATCGCCTTATCAGGTGATGGCGGGCACGGTGATCGCCGGCGCGCTGGTGACAGGTATCAAGTCGGACTTGCCCGGCGACGTGATCGCCACGGTGACGGAGCCGGTCTTTGACACGGCCACGGGCAAGTTCCTGCTGATCCCGCAGGGATCGCGCATCCTCGGGCGTTACAACAGCCAGGTCAGCTACGGGCAGAGCCGCGTGCAGGTCGTGTGGAACCGGGTCATCCTGCCCGACACGTCATCGCTGACGCTCGACAACCTCGTGGGCACCGACCCGGCCGGCTACGCCGGCCTGGAAGACGACGTGGACTGGCATTGGAATCGCATCGTCGCGGGCGCGGTGCTGACGACGCTGCTAGGCGTGGGCGCCGAGCTTGCCGCGCCGGAGAACCGCCAGGACGGCAACCGCATCGTCATCGCCGGGCGCGACAGCGCACAGGACAGCATCAATCAAGTCGGCCAGGAGATCACCCGGCGCAACATGAACATCCAGCCCACGCTGACCAGCCGGCCCGGCCTGCCGGTGCGGATCATCGTCAACCGGGATCTTGTGCTGCGGCCGTACCAGCCGCTGTTCTTCAACCGGGGAGCCTCGCAATGA
PROTEIN sequence
Length: 429
MSQDDTPDLATPHPGKVAPEAVALRAQPRPVTRLNRRTLAILVGGLSVVVLGATIWSLQPQRRGANEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPDVPELGPPLPGDLGPAIVNSQQPVTPAYAPPGHDPADALRKEADAAAASSVFFRSGGQGQAAATVAQAAPGAPGGASALAAFDPLGAGPASTAAQPADPTAVQNRQDQKEAFLKGGSTETRNSGNLALPASPYQVMAGTVIAGALVTGIKSDLPGDVIATVTEPVFDTATGKFLLIPQGSRILGRYNSQVSYGQSRVQVVWNRVILPDTSSLTLDNLVGTDPAGYAGLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDSINQVGQEITRRNMNIQPTLTSRPGLPVRIIVNRDLVLRPYQPLFFNRGASQ*