ggKbase home page

SCN18_30_10_14_R3_B_scaffold_113_197

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 205317..206531

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter Bcr/CflA subfamily id=12495807 bin=THIO_MID species=Pseudomonas sp. Chol1 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 404.0
  • Bit_score: 792
  • Evalue 2.00e-226
MFS transporter, DHA1 family {ECO:0000313|EMBL:CDH47215.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 386.0
  • Bit_score: 404
  • Evalue 1.70e-109
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 378.0
  • Bit_score: 394
  • Evalue 2.60e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCGTTCGAACAGACACTATCTCGAATTCGTCGTCATTCTCGGCGCGCTGACCGCCTTCGCGCCCCTGGCGATCGACATGTACCTGCCGGCCTTGCCGGCGATCGAGCGCGCCTTGCAGGGCAATATGGCCCAGGGCCAGTTCACGCTGGCGACCTTTTTCATCGGCTTCGCGTTGGGGCAGGCGGCGTTCGGGCCGCTGGCCGACCGTTTCGGGCGCAAGCGGCCGCTGTACGCGGGGCTGGTCCTGTTCATTTTCGCCTCCGCCGCCTGCGCCCTGGCCGCGTCGATCCAGGCACTCGCTGCCGCGCGTTTCGTGCAGGCGCTCGGCGCTTGCGCCGGTGCGGTCGTCGGTCGTGCGATGGTGCGCGATTTGTTCGAGCCGGCCGACACCGTGCGCGTGTTTTCCACGCTGATGCTGGTTATGGGGATTGCCCCCATCCTGGCGCCGCTGGTGGGCGGCTATCTACTGGTTGGGTTCGGCTGGCAGGCCATCTTCTGGATGCTCGCGCTCTTTGGCGGGATCTGCCTGCTGGCGGCGCGGCGGCTGCCGGAGACGCACCGCGAGACATCGCCCCGCCCGCTCGCTGTGGGGCGTGTCCTGCACGATTACCTGGCTTTGTTGCGACACCGGCGCTATCTCGGCCATGTGCTGACCGGTGCCTTCAGCGCTGCCGGCATGTTCGCCTATATCGCGGGCTCGCCCTTCGTGTTCATCGAGTTGCACGGCGTACCGCCGGAACATTATGGCTGGCTGTTCGGCAGCAATGCGCTCGGGCTGATCCTCGCTTCGCAGCTCAATGGCCGTCTGCTGCACCGCCGTCTGGGTGCCGAACGCGTGCTGCGCCTTGCCGGCTGGGTTCAGGCGGCGGCAGGGCTGGCGCTGCTGGCAATGGCCGTGAGCGGCGTGGGTGGGCTGCCCGGCATCATGCTGCCGTTGTTCGTCTACATCGCCTGCGGCGGTTTCGTGATGCCGAACGCGACGGCCCTGGCGATGGCGCCATTCAGCACCCATGCCGGCACGGCATCGGCCTTGCTGGGCAGTGTCCAGTTCGCTCTGGCCGCATGCGCCGCACTGGCGGTTGGCGCGTTGCATGCCGTGAGCGCGATCCCGATGGCGGGCGTCGTCGCCGCATGCGGCCTGCTGGGCGTGGTGGCGCATGCCGGCCTGGTGGGCGCGCGCGCACCAAGCCATTCCGGCCGGATGACGCCCTGA
PROTEIN sequence
Length: 405
MRSNRHYLEFVVILGALTAFAPLAIDMYLPALPAIERALQGNMAQGQFTLATFFIGFALGQAAFGPLADRFGRKRPLYAGLVLFIFASAACALAASIQALAAARFVQALGACAGAVVGRAMVRDLFEPADTVRVFSTLMLVMGIAPILAPLVGGYLLVGFGWQAIFWMLALFGGICLLAARRLPETHRETSPRPLAVGRVLHDYLALLRHRRYLGHVLTGAFSAAGMFAYIAGSPFVFIELHGVPPEHYGWLFGSNALGLILASQLNGRLLHRRLGAERVLRLAGWVQAAAGLALLAMAVSGVGGLPGIMLPLFVYIACGGFVMPNATALAMAPFSTHAGTASALLGSVQFALAACAALAVGALHAVSAIPMAGVVAACGLLGVVAHAGLVGARAPSHSGRMTP*