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SCN18_30_10_14_R3_B_scaffold_113_210

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 222890..223393

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12495794 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 332
  • Evalue 1.40e-88
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 162.0
  • Bit_score: 242
  • Evalue 6.90e-62
Sigma-24 (FecI) {ECO:0000313|EMBL:AAZ97607.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 162.0
  • Bit_score: 242
  • Evalue 3.40e-61

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGCGGCCCGGCCCTGAATCCGATCTGATCGACCACCTCCCCCGGCTGCGCCGCTATGCGCGGGCGCTGACGGGCGACGCGGCGCGCGCCGACGACCTGGTACAGGACACCGTCGAGCGTGCGCTCGTCAAGCGGGCATTGTGGCGGCCGGGCAGCGACCTGCGCGCCTGGCTGTTCACCGTGATGCACAATCTGTTCGTGAATCAGATGCGGGCGTCCCGGCCGCCCGATACCCCGCTGGACGAAGCGCCGGACATGCCGGTGAGCGGCGGGCAGATGGGCGCGCTGGCGACGCGCGACGTGCACGCCGCCCTGATGCGTCTGCCGGAAACGCAGCGGGAAGTGATGCTGCTGGTCGGTCTGGAACAGTTCGGCTATGCCGAGGCTGCGCACGTACTGGGCGTGCCGGTCGGCACGGTCATGTCGCGTCTGGCGCGGGCACGCGAGCAGTTGCGGCGCGATCTGGCAGGCGAGCCGGCCGTACCCTTGAAGGTGGTGAAATGA
PROTEIN sequence
Length: 168
MRPGPESDLIDHLPRLRRYARALTGDAARADDLVQDTVERALVKRALWRPGSDLRAWLFTVMHNLFVNQMRASRPPDTPLDEAPDMPVSGGQMGALATRDVHAALMRLPETQREVMLLVGLEQFGYAEAAHVLGVPVGTVMSRLARAREQLRRDLAGEPAVPLKVVK*